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Running time of the in silico human genome dataset with various configurations on the k parameter (in minutes)
| Methods | k = 19 | k = 23 | k = 27 | k = 31 |
|---|---|---|---|---|
| deBWT | 142 | 124 | 131 | 134 |
| deBWT (no conversion) | 75 | 51 | 47 | 48 |
‘DeBWT’ indicates the elapsed time of deBWT, and ‘deBWT (no conversion)’ deducts the time of the format conversion of Jellyfish output file.
