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Memory footprints with 32 CPU cores (in Gigabytes)
| Methods | Human genomes | Human contigs | Primate genomes |
|---|---|---|---|
| deBWT | 120/78/38 | 120/63/34 | 235/203/58 |
| ParaBWT | 30 | 30 | 29 |
| RopeBWT2 | 30 | 24 | 40 |
| Supplement | |||
| KMC2 | 119 | 119 | 119 |
For the ‘x/y/z’ of deBWT in the memory columns, the x, y and z values respectively indicate the memory footprints of Jellyfish, phase1 of deBWT, and phases2 and phases3 of deBWT.
