Table 1. Genomic distribution of PATs/PACs in the datasets.
Dataset | Sense PATsa/PACsb | Intergenic PATsa/PACsb | Antisense PATsa/PACsb | |||
---|---|---|---|---|---|---|
5UtrPASs | cdsExonPASs | cdsIntronPASs | 3UtrPASs | |||
PAT_L | 93586/990 | 121148/5249 | 69859/2586 | 4822975/20878 | 960450/16280 | 499806/5130 |
PAT_F | 18053/414 | 12085/573 | 66571/1426 | 9325848/21478 | 274947/9139 | 1056046/4469 |
PAT_R | 180256/1618 | 104338/6713 | 176293/5406 | 18478178/24127 | 2191611/24170 | 3474717/8591 |
PAT_LFRc | 263588/744 | 169287/7330 | 262791/3708 | 31585245/25202 | 1677324/11427 | 3059319/6675 |
DRS_L | 85027/825 | 20741/612 | 205174/3057 | 10417997/19969 | 818065/18839 | 1488450/5094 |
aThe total number of PATs: poly(A) tag reads that support high-quality individual poly(A) sites(i.e., ≥3 PAT reads).
bThe total number of poly(A) site clusters (PACs) in the respective genomic regions.
cPAT_LFR is the dataset combining PAT_L, PAT_F and PAT_R together.