Table 3.
Recombination analysis of tomato leaf curl Sudan virus isolate-tomato-Jeddah using the RDP 4.0
| Break point positions | Minor parent | Major parent | Detection methods | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Start | End | RDP | GENCONV | MaxChi | Chimaera | SiScan | 3 Seq | ||
| 2052 | 2752 | ToLCSDV-WM:11-Sud (KC763630) | ToLCSDV-WM-Sud-GU180085 | 1.657 × 10−14 | 1.274 × 10−15 | 7.395 × 10−14 | 8.767 × 10−13 | 3.509 × 10−35 | 1.328 × 10−12 |
| 1954 | 2688 | TYLCV-Boj: Al-Iran (KC106648) | ToLCSDV-WM-Sud-GU180085 | 2.154 × 10−14 | 1.247 × 10−15 | 5.145 × 10−14 | 8.429 × 10−13 | 3.183 × 10−35 | 1.239 × 10−12 |