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. 2016 Apr 20;23(3):241–251. doi: 10.1093/dnares/dsw011

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© The Author 2016. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 5. — Venn diagram showing the comparing of PTEMD-detected TEs and TIPs with related programs. (A) Repeat sequence families independently detected by four programs of Repeatscout, Piler, RepeatMasker, and RECON; a total number of 138 non-redundant repeat families have been identified in M. oryzae genome. (B) Comparing the 14 PTEMD-A-detected candidate active TEs with the 138 non-redundant repeat families, 12 families are overlapped. (C) Comparing the TIPs detected by PTEMD-B, TEMP, RelocaTE, and T-lex. The total non-redundant TIPs detected by all of the four tools is 301, and 217 of them are co-detected by all of the four tools. This figure is available in black and white in print and in colour at DNA Research online.