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. 2016 Apr 20;23(3):241–251. doi: 10.1093/dnares/dsw011

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© The Author 2016. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 6. — Annotation and TIPs of 15 repeat families detected by PTEMD in M. oryzae. The annotation of each TE family is based on the most similar repeats in RepBase and NCBI NT and NR databases. The third column indicates the Top-paralogous E-value of the sequence alignments between the TEs and known repeats for each family. Middle panel: PTEMD-detected TIPs in HM-1 and HM-2 strains compared with the number of TEs in the reference genome. This figure is available in black and white in print and in colour at DNA Research online.