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. 2016 Jun 16;6:28130. doi: 10.1038/srep28130

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Copyright © 2016, Macmillan Publishers Limited

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X-axis presents SNP effectiveness number, and Y-axis shows five pear species. SNP effectiveness types: 1 SNPs are present in the upstream region of 2 Kb. 2 SNPs are present in the downstream region of 2 Kb. 3 SNPs are present 2 bp around the boundaries of exon and intron. 4 SNPs are in introns caused by selective splicing. 5 SNPs appear in the initiation codon and change the function. 6 SNPs appear in the termination codon and change the function. 7 SNPs appear in the exon and cause synonymous mutation. 8 SNPs are present in the exon and cause premature stop codons. 9 SNPs appear in the exon and cause nonsynonymous mutation. 10 SNPs appear in the termination codon and do not change the function. 11 SNPs appear in the initiation codon and do not change the function. 12 SNPs meet the missing ‘N’ in the genome.