Table 1. Read number and unique gene mapping for RNA-seq.
Samples | No. of raw reads | No. of clean reads | No. of mapping genes | Percentage of clean read mapping rates (%) |
---|---|---|---|---|
HS1 | 11,302,851 | 10,328,076 | 25,688 | 75.63 |
HS2 | 10,154,316 | 9,197,441 | 24,765 | 75.11 |
HS3 | 12,117,316 | 9,398,656 | 23,071 | 74.06 |
HS4 | 11,213,396 | 10,109,015 | 23,635 | 74.63 |
HS5 | 11,243,703 | 10,216,762 | 22,655 | 75.76 |
HS6 | 11,950,723 | 11,000,668 | 22,663 | 75.42 |
HS7 | 10,668,693 | 9,779,232 | 21,374 | 73.93 |
KRLXL1 | 12,362,986 | 11,781,418 | 26,289 | 73.72 |
KRLXL2 | 12,239,312 | 11,619,212 | 24,464 | 73.25 |
KRLXL3 | 11,970,718 | 11,341,031 | 24,826 | 73.18 |
KRLXL4 | 12,395,731 | 11,272,539 | 23,929 | 73.38 |
KRLXL5 | 11,885,029 | 10,253,055 | 23,148 | 72.44 |
KRLXL6 | 12,197,320 | 11,152,288 | 23,282 | 73.74 |
KRLXL7 | 11,847,303 | 11,274,519 | 22,249 | 73.20 |
NG1 | 12,516,088 | 12,006,578 | 26,173 | 74.42 |
NG2 | 11,942,855 | 11,447,523 | 25,681 | 74.55 |
NG3 | 11,548,878 | 9,242,452 | 23,346 | 75.35 |
NG4 | 12,396,607 | 10,214,122 | 23,310 | 75.36 |
NG5 | 12,533,756 | 8,731,570 | 21,469 | 75.09 |
NG6 | 12,428,560 | 11,425,645 | 22,259 | 74.98 |
NG7 | 12,461,123 | 11,408,415 | 21,801 | 74.97 |
RC1 | 11,854,995 | 11,287,205 | 25,675 | 73.62 |
RC2 | 11,695,092 | 11,085,589 | 25,046 | 73.10 |
RC3 | 12,087,344 | 11,566,921 | 24,728 | 71.81 |
RC4 | 11,734,817 | 11,298,495 | 24,419 | 73.45 |
RC5 | 11,678,523 | 11,180,375 | 24,539 | 72.98 |
RC6 | 11,693,653 | 11,288,167 | 22,323 | 74.25 |
RC7 | 12,468,584 | 11,734,107 | 22,473 | 76.01 |
YL1 | 12,098,295 | 11,396,714 | 26,062 | 75.83 |
YL2 | 12,449,966 | 11,712,248 | 25,643 | 75.47 |
YL3 | 12,564,888 | 11,788,331 | 24,220 | 73.63 |
YL4 | 12,257,369 | 10,177,818 | 23,495 | 73.74 |
YL5 | 12,304,901 | 10,475,211 | 23,431 | 74.09 |
YL6 | 11,932,440 | 11,371,346 | 22,837 | 74.24 |
YL7 | 11,123,512 | 10,582,639 | 21,394 | 75.92 |