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. 2016 Jun 16;16:130. doi: 10.1186/s12862-016-0692-2

Table 1.

Polymorphism statistics for eight studied loci

Locus Chra Lb Speciesc Nd Se π (%)f θ (%)g TDh FLDi D (%)j
17483 A 484 A.s. 44 9 0.323 0.427 −0.701 −0.566 3.273
A.p. 32 13 0.805 0.667 0.675 0.149 3.648
A.d. 48 10 0.268 0.466 −1.225 −1.641 3.594
All 124 32 0.731 1.226 3.494
21281 A 355 A.s. 28 29 1.868 2.099 −0.403 −1.197 2.998
A.p. 20 24 1.893 1.906 −0.025 −0.200 2.634
A.d. 38 22 1.071 1.475 −0.922 −0.823 3.136
All 86 50 1.905 2.802 2.974
24972 A 636 A.s. 24 29 0.999 1.221 −0.683 −1.224 2.732
A.p. 38 35 0.819 1.310 −1.314 −2.431 2.557
A.d. 38 30 0.861 1.123 −0.809 −0.404 2.578
All 100 71 1.031 2.156 2.607
RPL5-4 A 390 A.s. 38 4 0.101 0.244 −1.420 −2.135 3.893
A.p. 50 15 0.994 0.859 0.484 1.112 4.359
A.d. 48 12 0.591 0.693 −0.438 0.407 4.049
All 136 35 1.383 1.636 4.120
ADAMTS6 Z 488 A.s. 35 0 0.000 0.000 / / 1.025
A.p. 43 2 0.019 0.095 −1.480 −2.462 0.829
A.d. 42 7 0.206 0.333 −1.050 −1.002 0.937
All 120 10 0.171 0.382 0.924
PPWD1 Z 566 A.s. 34 14 0.550 0.605 −0.295 0.228 2.520
A.p. 45 9 0.318 0.364 −0.358 0.712 2.493
A.d. 13 15 0.716 0.854 −0.676 −0.795 2.202
All 92 39 0.663 1.353 2.462
TG401 Z 829 A.s. 39 0 0.000 0.000 / / 2.051
A.p. 45 4 0.027 0.110 −1.764 −2.240 1.697
A.d. 44 1 0.005 0.028 −1.115 −1.803 2.536
All 128 18 0.712 0.400 2.093
TG1505 Z 532 A.s. 39 0 0.000 0.000 / / 1.880
A.p. 43 0 0.000 0.000 / / 2.444
A.d. 42 0 0.000 0.000 / / 2.632
All 124 6 0.508 0.209 2.330

aAutosome (A), Chromosome Z (Z)

bLength of sequence (bp)

c A. scirpaceus (A.s.), A. palustris (A.p.), A. dumetorum (A.d.)

dNumber of haploid sequences

eNumber of segregating sites

fAverage number of nucleotide differences

gProportion of polymorphic sites

hTajima’s D

iFu and Li’s D

jDivergence to outgroup measured as average pairwise divergence, Dxy