Table 1.
Locus | Chra | Lb | Speciesc | Nd | Se | π (%)f | θ (%)g | TDh | FLDi | D (%)j |
---|---|---|---|---|---|---|---|---|---|---|
17483 | A | 484 | A.s. | 44 | 9 | 0.323 | 0.427 | −0.701 | −0.566 | 3.273 |
A.p. | 32 | 13 | 0.805 | 0.667 | 0.675 | 0.149 | 3.648 | |||
A.d. | 48 | 10 | 0.268 | 0.466 | −1.225 | −1.641 | 3.594 | |||
All | 124 | 32 | 0.731 | 1.226 | 3.494 | |||||
21281 | A | 355 | A.s. | 28 | 29 | 1.868 | 2.099 | −0.403 | −1.197 | 2.998 |
A.p. | 20 | 24 | 1.893 | 1.906 | −0.025 | −0.200 | 2.634 | |||
A.d. | 38 | 22 | 1.071 | 1.475 | −0.922 | −0.823 | 3.136 | |||
All | 86 | 50 | 1.905 | 2.802 | 2.974 | |||||
24972 | A | 636 | A.s. | 24 | 29 | 0.999 | 1.221 | −0.683 | −1.224 | 2.732 |
A.p. | 38 | 35 | 0.819 | 1.310 | −1.314 | −2.431 | 2.557 | |||
A.d. | 38 | 30 | 0.861 | 1.123 | −0.809 | −0.404 | 2.578 | |||
All | 100 | 71 | 1.031 | 2.156 | 2.607 | |||||
RPL5-4 | A | 390 | A.s. | 38 | 4 | 0.101 | 0.244 | −1.420 | −2.135 | 3.893 |
A.p. | 50 | 15 | 0.994 | 0.859 | 0.484 | 1.112 | 4.359 | |||
A.d. | 48 | 12 | 0.591 | 0.693 | −0.438 | 0.407 | 4.049 | |||
All | 136 | 35 | 1.383 | 1.636 | 4.120 | |||||
ADAMTS6 | Z | 488 | A.s. | 35 | 0 | 0.000 | 0.000 | / | / | 1.025 |
A.p. | 43 | 2 | 0.019 | 0.095 | −1.480 | −2.462 | 0.829 | |||
A.d. | 42 | 7 | 0.206 | 0.333 | −1.050 | −1.002 | 0.937 | |||
All | 120 | 10 | 0.171 | 0.382 | 0.924 | |||||
PPWD1 | Z | 566 | A.s. | 34 | 14 | 0.550 | 0.605 | −0.295 | 0.228 | 2.520 |
A.p. | 45 | 9 | 0.318 | 0.364 | −0.358 | 0.712 | 2.493 | |||
A.d. | 13 | 15 | 0.716 | 0.854 | −0.676 | −0.795 | 2.202 | |||
All | 92 | 39 | 0.663 | 1.353 | 2.462 | |||||
TG401 | Z | 829 | A.s. | 39 | 0 | 0.000 | 0.000 | / | / | 2.051 |
A.p. | 45 | 4 | 0.027 | 0.110 | −1.764 | −2.240 | 1.697 | |||
A.d. | 44 | 1 | 0.005 | 0.028 | −1.115 | −1.803 | 2.536 | |||
All | 128 | 18 | 0.712 | 0.400 | 2.093 | |||||
TG1505 | Z | 532 | A.s. | 39 | 0 | 0.000 | 0.000 | / | / | 1.880 |
A.p. | 43 | 0 | 0.000 | 0.000 | / | / | 2.444 | |||
A.d. | 42 | 0 | 0.000 | 0.000 | / | / | 2.632 | |||
All | 124 | 6 | 0.508 | 0.209 | 2.330 |
aAutosome (A), Chromosome Z (Z)
bLength of sequence (bp)
c A. scirpaceus (A.s.), A. palustris (A.p.), A. dumetorum (A.d.)
dNumber of haploid sequences
eNumber of segregating sites
fAverage number of nucleotide differences
gProportion of polymorphic sites
hTajima’s D
iFu and Li’s D
jDivergence to outgroup measured as average pairwise divergence, Dxy