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. 2016 Jun 16;17:237. doi: 10.1186/s12859-016-1103-9

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© Limasset et al. 2016

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Representation of the mapping of a read (top sequence) on a CDBG, whose nodes are represented on lines 2, 3, and 4. (step 1) the overlaps of the graph that are also present in the read are found (here TACAC, GCTGC, and AGCTA, represented on line 1). (step 2) unitigs that map the beginning and the end of the read are found (those represented on line 2). (step 3) cover the rest of the read, guided by the overlaps (here with unitigs represented on lines 3 and 4)