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. 2016 Jun 17;11(6):e0157712. doi: 10.1371/journal.pone.0157712

Table 1. Maximum number of alleles at loci, genetic diversity parameters and index of clonal diversity within the 357 cultivars of Colocasia esculenta obtained by genotyping with 11 nuclear microsatellite loci.

Continent Countries N N with 2 alleles N with 3 alleles An Ae' Ap I uh N° of MLL & UG G R
Africa South Africa 56 0 56 33 1.03 2 0.04 0.02 2 MLL 2 0.02
Burkina Faso 39 13 26 38 1.12 0 0.09 0.07 2 MLL 2 0.03
Ghana 80 72 8 46 1.03 0 0.05 0.03 3 MLL 3 0.03
Madagascar 12 10 2 51 1.1 5 0.11 0.07 5 (2 MLL & 3 UG) 5 0.36
Réunion 3 2 1 NA NA NA NA NA 2 MLL 2 0.50
Nigeria 1 0 1 NA NA NA NA NA 1 MLL 1
Madeira 5 1 4 49 1.16 0 0.14 0.12 5 (1 MLL & 4 UG) 5 1
Total Africa 196 98 98 91 1.15 7 0.13 0.09 20 0.10
America Costa Rica 5 1 4 44 1.13 1 0.12 0.1 3 (2 MLL & 1 UG) 3 0.50
Martinique 10 10 0 30 1.07 1 0.06 0.05 3 (2 MLL & 1 UG) 3 0.22
Guadeloupe 3 3 0 NA NA NA NA NA 3 (2 MLL & 1 UG) 3 1
Trinidad & Tobago 1 1 0 NA NA NA NA NA 1 MLL 1
Total America 19 15 4 56 1.12 2 0.12 0.08 10 0.50
Asia India 43 12 31 125 1.2 25 0.21 0.13 37 (5 MLL & 32 UG) 37 0.86
Indonesia 37 33 4 109 1.16 7 0.17 0.11 31 (7 MLL & 24 UG) 31 0.83
Philippines 11 11 0 51 1.11 2 0.11 0.08 10 (3 MLL & 7 UG) 10 0.90
Japan 2 0 2 NA NA NA NA NA 2 MLL 2 1
Malaysia 2 2 0 NA NA NA NA NA 2 UG 2 1
Thailand 2 2 0 NA NA NA NA NA 2 (1 MLL & 1 UG) 2 1
Vietnam 3 2 1 NA NA NA NA NA 3 (1 MLL & 2 UG) 3 1
Total Asia 100 62 38 155 1.18 46 0.21 0.13 87 0.87
Pacific PNG 11 11 0 56 1.11 4 0.12 0.08 11 UG 11 1
Vanuatu 31 31 0 78 1.13 5 0.14 0.09 31 (1 MLL & 30 UG) 31 1
Total Pacific 42 392 0 91 1.13 9 0.14 0.09 42 1

N number of cultivars collected in each country and continent, N with 2 alleles, number of cultivars showing two alleles at all loci investigated, N with 3 alleles, number of cultivars showing three alleles at least at one locus among the 11 investigated, An total number of alleles, Ae’ number of effective alleles, AP number of private alleles, I Shannon's information index, μh unbiased diversity, NA: non-analysed cultivars (due to the reduced number of cultivars within groups), N° of MLL & UG, number of MLLs and UGs within the country and continent, G, number of genotypes considered to calculate R, R, index of clonal diversity.