Table 2. Summary of mCdkl5 transcript isoforms.
Mouse | ||||||||
---|---|---|---|---|---|---|---|---|
X-chromosome coordinates | Cdkl5 isoform | |||||||
Exon | Size (bp) | Exon start | Exon end | 1 | 2 | 6 | 7 | 8 |
1 | 91 | 160994688 | 160994591 | + | + | |||
1a#$ | 200 | 160976506 | 160976307 | + | + | + | ||
2 | 231 | 160928655 | 160928425 | + | + | + | + | + |
3 | 35 | 160924486 | 160924452 | + | + | + | + | + |
4 | 46 | 160876568 | 160876523 | + | + | + | + | + |
5 | 137 | 160866053 | 160865917 | + | + | + | + | + |
6 | 121 | 160861054 | 160860934 | + | + | + | + | + |
7 | 60 | 160858859 | 160858800 | + | + | + | + | + |
8 | 91 | 160856445 | 160856355 | + | + | + | + | + |
9 | 190 | 160852330 | 160852141 | + | + | + | + | + |
10 | 81 | 160847017 | 160846937 | + | + | + | + | + |
11 | 152 | 160840446 | 160840295 | + | + | + | + | + |
12 | 967 | 160834834 | 160833868 | + | + | + | + | + |
13 | 102 | 160830022 | 160829921 | + | + | + | + | + |
14 | 106 | 160829648 | 160829543 | + | + | + | + | + |
15 | 124 | 160824098 | 160823975 | + | + | + | + | + |
16 | 100 | 160816991 | 160816892 | + | + | + | + | + |
17 | 123 | 160813050 | 160812928 | + | ||||
18 | 120 | 160811716 | 160811597 | + | + | + | + | + |
19# | 217 | 160808691 | 160808475 | + | + | + | ||
7065 | 160808691 | 160801627 | + | + | ||||
20#$ | 83 | 160800092 | 160800010 | + | ||||
21#$ | 141 | 160799251 | 160799111 | + | + | |||
22#$ | 280 | 160784582 | 160784582 | + |
# novel exon or UTR, not previously characterised
$ mouse-specific, not orthologous to human
Exon numbers, sizes and co-ordinates for the mouse Cdkl5 gene (GRCm38/mm10 assembly). Exon composition of each transcript isoform is indicated. Starting coordinates for the main TSS of each initial exon are italicised; coordinates of polyadenylation sites in each terminal exon are underlined. Bold indicate exons that contain multiple splice sites.