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. 2016 Apr 20;31(2):104–110. doi: 10.1264/jsme2.ME15144

Table 2.

Bacterial isolates obtained from rhizosphere soil of Welsh onion and onion in isolation trial 1–4

Phylum Genus Number of species on medium

From Welsh onion rhizosphere From onion rhizosphere


Trial 1 Trial 2 Trial 3 Trial 4




R2Aa 1/4 TSAb R2A R2A-C/Tc R2A-C/T PSR2A-C/Td PSR2A-C/T PSR2A-C/T/Ne PSR2A-C/T PSR2A-C/T/N
Bacteroidetes Flavobacterium 5 5 4
Chryseobacterium 1 1 4 8 6 1 5 3
Niabella 2 2 14 9 2 4 6 6
Chitinophaga 1 2 1 2
Niastella 1 2
Dyadobacter 1
Taibaiella 1 1 1 2
Flavitalea 1
Proteobacteria Sphingomonas 22 1 6 1
Pseudoxanthomonas 10 1
Ralstonia 3 2
Sphingopyxis 1 1 1
Frateuria 1
Luteibacter 1
Lysobacter 1
Rhodanobacter 1
Pseudomonas 1
Sphingobium 1
Stenotrophomonas 1 2
Variovorax 1
Actinobacteria Microbacterium 3 20 1 5 2
Leifsonia 1 3 2 5
Mycobacterium 1 1
Aeromicrobium 1
Cellulosimicrobium 1
Rhodococcus 1
Terrabacter 1
Agrococcus 1
Total yellow/orange bacterial colonies 38 33 14 14 17 19 20 15 23 19
Total bacterial colonies 97 49 121 106 169 183 248 201 132 155
a

Reasoner’s 2A agar

b

1/4-strength tryptic soy agar

c

Reasoner’s 2A supplemented with cycloheximide and tobramycin

d

Phosphate separately autoclaved R2A supplemented with cycloheximide and tobramycin

e

Phosphate separately autoclaved R2A supplemented with cycloheximide, tobramycin, and NaCl