Table 2.
Compound | Structure | Organism | Gene | Transcriptome | Proteome |
---|---|---|---|---|---|
Salicylic acid | Bacillus subtilis 168† | yuaE (STL) | 6–8 | 5–6 | |
yojG (BshB2) | 3–4 | – | |||
yhdN (FosB) | 3–4 | 3–4 | |||
2-methylhydroquinone | Bacillus subtilis 168‡ | yjoA (STL) | 6 | – | |
yojG (BshB2) | 6–7 | – | |||
yuaE (STL) | 10–14 | 4–10 | |||
yqiW (BrxB) | 4–6 | – | |||
6-brom-2-vinyl-chroman-4-on | Bacillus subtilis 168‡ | yjoA (STL) | 4–5 | – | |
yojG (BshB2) | 9–10 | – | |||
yuaE (STL) | 7–10 | 3–8 | |||
yllA (BshC) | 4 | – | |||
yqiW (BrxB) | 4–6 | – | |||
Hydrogen peroxide | H2O2 | Staphylococcus aureus MW2§ | MW1348 (BshA) | 0.5 | ND |
MW2611 (BstA/STL) | 3 | ND | |||
MW2442¶¶ (GlxA) | 2 | ND | |||
MW1463¶¶ (GlxB) | 3 | ND | |||
MW1467¶¶ (BrxB) | 6 | ND | |||
Bacillus anthracis Sterne¶ | BA_1558 (BshA) | 2 | ND | ||
BA_1557 (BshB1) | 2 | ND | |||
BA_3524 (BshB2) | 2 | ND | |||
BA_4058 (BshC) | 3 | ND | |||
BA_1515¶¶ (YpdA) | 2 | ND | |||
Diamide | Staphylococcus aureus COL# | SACOL1498 (BshA) | 2 | ND | |
SACOL1190 (BshC) | 5 | ND | |||
SACOL2717 (BstA/ STL) | 0.3 | ND | |||
SACOL1553¶¶ (GlxB) | 2 | ND | |||
SACOL1520¶¶ (YpdA) | 4 | ND | |||
Nitric oxide | NO | Bacillus subtilis 168†† | yuaE (STL) | ND | 2–3 |
Staphylococcus aureus COL†† | SACOL0614 (BshB2) | ND | 3 | ||
SACOL1520¶¶ (YpdA) | ND | 1–3 | |||
Nitrite | NO2− | Staphylococcus aureus N315‡‡ | SA1291 (BshA) | 3 | ND |
SA0525 (BshB2) | 3 | ND | |||
SA1020 (BshC) | 5 | ND | |||
SA2310¶¶ (GlxA) | 8 | ND | |||
SA1311¶¶ (YpdA) | 3 | ND | |||
Azurophilic granule proteins | - | Staphylococcus aureus MW2§ | MW1348 (BshA) | 0.6 | ND |
MW0552 (BshB2) | 0.5 | ND | |||
MW2611 (BstA/STL) | 2 | ND | |||
MW1463¶¶ (GlxB) | 0.7 | ND | |||
MW1318¶¶ (BrxA) | 0.6 | ND | |||
MW1467¶¶ (BrxB) | 2 | ND | |||
Hypochlorous acid | HOCl | Staphylococcus aureus MW2§ | MW1348 (BshA) | 0.5 | ND |
MW2611 (BstA/STL) | 2 | ND | |||
MW2442¶¶ (GlxA) | 3 | ND | |||
MW1318¶¶ (BrxA) | 0.6 | ND | |||
MW1467¶¶ (BrxB) | 2 | ND | |||
Mammalian peptidoglycan recognition protein (PGLYRP4) | – | Bacillus subtilis 168§§ | yuaE (STL) | 8 | ND |
Numbers < 1 show down-regulated genes, where 1 is no change.
Van Duy et al. 2007; treatment with 4 mM salicylic acid for 10 min, range shown is from duplicate experiments.
Van Duy et al. 2007; 100 µg/ml 6-brom-2-vinyl-chroman-4-on or 63 µg/ml of 2-methylhydroquinone (treatment for 10 min for both conditions), range shown is from duplicate experiments.
Palazzolo-Balance et al. 2008; treatment with 100 µg/ml azurophilic granule proteins, 5 mM H2O2, or 25 µM HOCl for 15 min for all conditions.
Pohl et al. 2011; treatment with 1.0 mM H2O2 for 10 min.
Posada et al. 2014; treatment with 1 mM diamide for 20 min.
Hochgrafe et al. 2008; treatment with 500 µM MAHMA NONOate (nitric oxide donor) 10 min, range shown is from duplicate experiments.
Schlag et al. 2007; treatment with 5 mM sodium nitrite for 6 h at 37°C.
Kashyap et al. 2014; treatment with 100 µg/ml PGLYRP4 for 30 min at 37°C.
Closest homolog to B. subtilis 168 gene.
ND: Not determined.