Table 1.
Microorganisms identified from contig (>10kb) assembly in particle-enrichment metagenomes and comparison to the reference genomes.
| Assembled Genome | Reference Genome | Genomes Comparison | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Metagenome | Putative Assembled genome | Class | Length of the contigs (Mb) | Number of contigs | GC content contigs (%) | Genome size (Mb) | GC content (%) | ANI (%) | Coverage (%) |
| SW | Roseobacter sp. MED193 | Alphaproteobacteria | 3.08 | 125 | 57.6 | 4.67 | 57.5 | 89.1 | 73.2 |
| SW | Lacinutrix sp. 5H-3-7-4 | Bacteriodetes | 3.04 | 22 | 30.7 | 3.29 | 30.8 | 93.2 | 83.3 |
| SW | Rhizobium sp. | Alphaproteobacteria | 0.37 | 28 | 59.7 | 4.24 | 62 | 78.6 | 24.1 |
| SW | Pseudophaeobacter arcticus | Alphaproteobacteria | 0.17 | 7 | 59.5 | 5.05 | 59.3 | 82.3 | 37.3 |
| SW | Unclassified | Gammaproteobacteria | 1.04 | 73 | 40.9 | – | – | – | – |
| SWde | Roseobacter sp. MED193 | Alphaproteobacteria | 4.31 | 19 | 57.3 | 4.67 | 57.5 | 98 | 87.4 |
| SWde | Bacteriovorax sp. DB6 IX | Deltaproteobacteria | 3.73 | 15 | 36.1 | 3 | 37.6 | 72.3 | 47.6 |
| SWde | Pseudoalteromonas haloplanktis TAC125 | Gammaproteobacteria | 0.12 | 10 | 40.1 | 3.85 | 40.1 | 82.2 | 42.9 |
| SWde | Unclassified | Gammaproteobacteria | 0.82 | 63 | 41.2 | – | – | – | – |
| SWcel | Roseobacter sp. MED193 | Alphaproteobacteria | 2.82 | 141 | 57.3 | 4.67 | 57.5 | 97.7 | 72.7 |
| SWcel | Flavobacterium beibuense | Bacteriodetes | 2.52 | 22 | 33.8 | 3.8 | 37.7 | 72.1 | 43.5 |
| SWcel | Gracilibacteria bacterium JGI-0000069-K10 | Gracilibacteria | 0.16 | 12 | 28.3 | 0.76 | 23 | 70.7 | 20 |
| SWcel | uncultured bacterium gcode4 | no rank | 0.14 | 10 | 28.8 | – | – | – | – |
| SWcel | Unclassified | Alphaproteobacteria | 4.03 | 57 | 61.1 | – | – | – | – |
| SWcel | Unclassified | Gammaproteobacteria | 0.84 | 65 | 40.7 | – | – | – | – |
| SWchi | Roseobacter sp. MED193 | Alphaproteobacteria | 2.78 | 18 | 59 | 4.67 | 57.5 | 82.8 | 64.7 |
| SWchi | Vibrio sp. F10 | Gammaproteobacteria | 2.6 | 26 | 45.3 | 4.41 | 43.3 | 76.7 | 53.1 |
| SWchi | Pseudoalteromonas undina | Gammaproteobacteria | 0.16 | 17 | 39.4 | 4 | 39.9 | 95.4 | 42.7 |
| SWchi | Pseudophaeobacter arcticus | Alphaproteobacteria | 0.12 | 3 | 59.4 | 5.05 | 59.3 | 81.1 | 33 |
| SWsnd | Roseobacter sp. MED193 | Alphaproteobacteria | 2.68 | 151 | 58 | 4.67 | 57.5 | 89.8 | 63.4 |
| SWsnd | Crocinitomix catalasitica | Bacteriodetes | 1.7 | 95 | 36.7 | 4.62 | 34.1 | 66.7 | 25 |
| SWsnd | Pseudoalteromonas undina | Gammaproteobacteria | 0.7 | 46 | 40.5 | 4 | 39.9 | 97.6 | 55.7 |
| SWsnd | Pseudophaeobacter arcticus | Alphaproteobacteria | 0.45 | 27 | 59.1 | 5.05 | 59.3 | 81.5 | 42.2 |
| SWsnd | Pseudoalteromonas haloplanktis TAC125 | Gammaproteobacteria | 0.21 | 14 | 41 | 3.85 | 40.1 | 79.8 | 40.5 |
| SWsnd | Unclassified | Alphaproteobacteria | 3.59 | 105 | 56.3 | – | – | – | – |
| SWsnd | Unclassified | Bacteriodetes | 6.03 | 162 | 34 | – | – | – | – |