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. 2016 Jun 22;6:28366. doi: 10.1038/srep28366

Table 1. QTLs for CL identified in the F2 population of a crossing between bmr-6 and SIL-05.

QTL Chr. Nearest markers LODa PVEb ac DOMd d/a DPEe
qCL-6 6 SB3484 6.09 26.0 60.7 37.9 0.62 SIL-05
qCL-7 7 SSR3_4143 7.01 35.8 60.2 69.7 1.16 SIL-05
qCL-9 9 SSR2_5041 3.77 17.6 45.2 29.7 0.66 SIL-05

aLOD threshold = 3.0.

bPercentage of Variance-explained; Percent of total phenotypic variation explained by the QTLs.

cAdditive effects are associated with the SIL-05 allele.

dDominance effect in the Het.

eDirection of phenotypic effect is the parent whose additive value of a marker allele increased the trait value.