Table 1. bioNerDS v2 dictionary breakdown.
| Type | Entries | URL | Still Accessible? |
|---|---|---|---|
| DB | 194 | databases.biomedcentral.com | N |
| SW | 262 | www.bioinformatik.de | N |
| PK | 1013 | www.bioconductor.org | Y |
| SW | 2101 | www.bioinformatics.ca/links_directory/ | Y |
| SW | 385 | evolution.genetics.washington.edu/phylip/software.html | Y |
| DB | 506 | www.ebi.ac.uk/miriam/main/ | Y |
| DB | 1510 | www.oxfordjournals.org/nar/database/a/ | Y |
| SW | 134 | www.netsci.org/Resources/Software/Bioinform/index.html | Y |
| DB | 358 | http://bioportal.bioontology.org/ontologies | Y |
| SW | 38 | www.bioinf.manchester.ac.uk/recombination/programs.shtml | Y |
| SW | 1196 | en.wikipedia.org/wiki/Wiki/<various> | Y |
| — | 517 | Manually generated entries | - |
Database and software URLs from which the bioNerDS database and software name dictionary is comprised, with 8,214 total entries. DB = databases; SW = software; PK = packages; data correct as of 16th December, 2013.