Skip to main content
. 2016 Jun 23;11(6):e0157809. doi: 10.1371/journal.pone.0157809

Table 2. Summary statistics of different properties of assembling into reference sequences.

Feature Value
(i) RAD-PE assembly statistics
Total contig base (bp) 113,529,353
The number of contigs retained 285,408
Average contig length (bp) 397
N50 contig length (bp) 509
GC content (%) 40.11
(ii) Match statistics
Mapping rate (%) 90.54
Average depth 31.56
Coverage (> 4×) (%) 87.22
SNP number 217,531