TABLE 2.
Method/details | G280R | T312M | E355Q | |
---|---|---|---|---|
mRNA level (11) | Location at the gene | Exon 6–7 | Exon 7 | Exon 8 |
Nucleotide change | Guanine 838 to adenine | Cytosine 935 to thymine | Guanine 1063 to cytosine | |
Impact on splicing | Reduced splicing efficiency by 75% relative to WT | No deleterious effect expceted | No deleterious effect expceted | |
Location in ZnT2 protein | Predicted location based on the three-dimensional model | Loop between the last transmembrane (TM) helix and a cytoplasmic domain | Loop between β-sheets of a cytoplasmic domain, being in close proximity to TM helices | Solvent-exposed residue in the C terminus |
Protein levels and stability | ZnT2 mutant degradation (11)a | 80% Enhanced degradation compared with WT | 40% Enhanced degradation compared with WT | 60% Enhanced degradation compared with WT |
Protein levels upon stable co-transfection with WT-ZnT2 (Fig. 5)b | Low expression compared with the WT | High expression compared with the WT | Slightly reduced expression compared with the WT | |
Mutant protein levels under stable transfection (Fig. 8)c | Slightly reduced expression compared with the WT | Slightly reduced expression compared with the WT | Very low expression compared with the WT | |
BiFC assay (Fig. 1) | Same YFP intensity levels as the WT | Same YFP intensity levels as the WT | Same YFP intensity levels as the WT | |
Calculated thermodynamic destabilization (Table III) | Very unstable | Stable | Unstable | |
Subcellular localization of ZnT2 | Mutant-mutant pairs-BiFC assay (Fig. 2) | Nearly all cells displayed ER localization | Half of the cells showed ER localization and half vesicular localization | Most of the cells showed ER localization |
Mutant-WT pairs-BiFC assay (Fig. 2) | Some vesicular localization was observed in most cells | Most cells preserved vesicular localization | Half of the cells showed ER localization and half vesicular localization | |
Dimerization | Immunoprecipitation analysis (11) | Forms homodimers with the WT protein | Forms homodimers with the WT protein | Form Homodimers with the WT protein |
BiFC assay (Fig. 1) | Forms homodimers at the same level of the WT protein | Forms homodimers at the same level of the WT protein | Form homodimers at the same level of the WT protein | |
Function | Zinc toxicity assay | Mutant non-functional; restored the ability to protect cells upon co-expression with WT-ZnT2 | Mutant non-functional; restored the ability to protect cells upon co-expression with WT-ZnT2 | Mutant non-funct ional; restored the ability to protect cells upon co-expression with WT-ZnT2 |
Zinpyr-1 accumulation | Mutant non-functional | Mutant non-functional | Mutant non-functional | |
Zinquin accumulation | Mutant non-functional. Yet, did not completely abolish the ability of the WT-ZnT2 protein to accumulate zinc | Mutant non-functional. Yet, did not completely abolish the ability of the WT-ZnT2 protein to accumulate zinc | Mutant non-functional. Yet, did not completely abolish the ability of the WT-ZnT2 protein to accumulate zinc | |
Zinc coordination | Based on the three-dimensional model | Close to zinc coordination site B in YiiP | Surrounded by conserved polar amino acids that are probably important for zinc transport | Direct coordination of zinc, on the equivalent site C of Y iiP |
Zinc levels in breast milk (time after birth) | Normal levels: 80 ± 30 μg/dl at 4–6 months (11) | 10 μg/dl (4 months) | <10 μg/dl (6 months) | 21 μg/dl (4 months) |
Age of infant upon TNZD onset (11) | 3 months | 5 months | 1.5 months |
a Determined by Western blotting analysis after cycloheximide treatment of the different mutants that were stably transfected into DT40 ZnT1−/− MT−/−ZnT4−/− cells.
b Determined by Western blot analysis of the different mutants that were stably co-transfected with WT-ZnT2 into DT40 ZnT1−/− MT−/− ZnT4−/− cells.
c Determined by Western blot analysis of the different mutants that were stably transfected into DT40 ZnT1−/− MT−/− ZnT4−/− cells.