Table 3.
List of Arabidopsis floral repressors downregulated in AtFTOE 2.1 line.
| Genes | Locus ID | Localization | Description | FC |
|---|---|---|---|---|
| At3g27200 | Plasma membrane | Plastocyanin-like domain-containing protein. Cupredoxin superfamily protein. | 0.11 | |
| SPL2, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 | At5g43270 | Nucleus | Member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. | 0.57 |
| AP2, APETALA 2, ATAP2, FL1, FLO2, FLORAL MUTANT 2, FLOWER | AT4G36920 | Nucleus | Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminacy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. | 0.46 |
| At3g45160 | Putative membrane lipoprotein. | 0.47 | ||
| ATMYB29 | At5g07690 | Nucleus | Encodes a putative transcription factor. | 0.56 |
| CA1 | At3g01500 | Apoplast, chloroplast stroma, thylakoid membrane, plasma membrane | Encodes a putative beta-carbonic anhydrase betaCA1. | 0.44 |
| At3g05730 | Extracellular region | Encodes a defensin-like (DEFL) family protein. | 0.27 | |
| At5g05960 | Extracellular region | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. | 0.23 | |
| BETA CA2 | At5g14740 | Apoplast, chloroplast, chloroplast stroma, thylakoid membrane, cytoplasm | Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. | 0.41 |
| At3g26960 | Extracellular region | Pollen Ole e 1 allergen and extensin family protein. | 0.37 | |
| BETA GLUCOSIDASE 33, BGLU33 | At2g32860 | Chloroplast | Beta glucosidase | 0.27 |
| XCP2, XYLEM CYSTEINE PEPTIDASE 2 | At1g20850 | Chloroplast, extracellular space, lysosome | Cysteine-type peptidase activity, peptidase activity | 0.15 |
| At4g30650 | Cell wall, chloroplast, extracellular space, lysosome | Xylem cysteine peptidase 2 (XCP2) | 0.50 | |
| At1g29660 | GDSL-motif esterase/acyltransferase/lipase.Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. | 0.24 | ||
| TON1 RECRUITING MOTIF 14, TRM14 | At3g61380 | Nucleus, plasma membrane | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related. | 0.39 |
| ATIMD3, IMD3, IPMDH1 | At1g31180 | Chloroplast stroma, mitochondrion, plastid, thylakoid | The AtIMD3 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. | 0.61 |
| OEP6, OUTER ENVELOPE PROTEIN 6 | At3g63160 | Chloroplast, chloroplast envelope, chloroplast outer membrane, chloroplast thylakoid membrane, thylakoid | Molecular_function unknown | 0.48 |
| At1g35190 | Cytoplasm | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.55 | |
| AGAMOUS-LIKE 19, AGL19, GL19 | At4g22950 | Nucleus | MADS-box protein AGL19. | 0.23 |
| At3g27200 | Cupredoxin superfamily protein,electron carrier activity, copper ion binding. | 0.11 | ||
| At2g39850 | Extracellular region | Subtilisin-like serine endopeptidase family protein; metabolic process, proteolysis. | 0.56 | |
| At3g53100 | Extracellular region | GDSL-motif esterase/acyltransferase/lipase,hydrolase activity, acting on ester bonds. | 0.33 | |
| At5g44400 | Cell wall, cytoplasm, plasmodesma | FAD-binding Berberine family protein. | 0.11 | |
| MORPHOGENESIS OF ROOT HAIR 1, MRH1 | At4g18640 | Chloroplast | Protein serine/threonine kinase activity. | 0.11 |
| ATPAP3, PAP3, PURPLE ACID PHOSPHATASE 3 | At1g14700 | Extracellular region, vacuole | acid phosphatase activity, metal ion binding, protein serine/threonine phosphatase activity. | 0.25 |
| At3g29030 | Cell wall, extracellular region, membrane | Encodes an expansin. Naming convention from the Expansin Working Group. | 0.17 | |
| At1g04040 | Cell wall, plant-type cell wall, plasmodesma, vacuolar membrane, vacuole | HAD superfamily, subfamily IIIB acid phosphatase | 0.27 | |
| TPPH, TREHALOSE-6-PHOSPHATE PHOSPHATASE H | At4g39770 | Cytoplasm, cytosol, nucleus | Trehalose biosynthetic process. | 0.61 |
| At5g63180 | Pectin lyase fold/virulence factor | Pectin lyase-like superfamily protein | 0.35 |