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Accuracy of NJ-SE trees. (A) Accuracies (PC) of NJ trees when the SE and IE methods with the TN model were used for the 66-sequence model tree in Fig. 2 A (see text). (B) Comparison of PC values for NJ-SE trees with those for NJ trees obtained with p-distance (NJ-p). For each simulation condition, average PC values from 100 replicate simulations are plotted.
