Table 1. Summary showing various endpoints from small-RNA sequencing of plasma samples from Day 0, 8 and 16 of the oestrous cycle (n = 8 heifers).
Day 0 | Day 8 | Day 16 | Mean | |
---|---|---|---|---|
Raw reads | 9,241,040 | 9,380,798 | 8,737,868 | 9,119,902 |
Reads with adapter | 8,461,507 | 8,361,521 | 7,918,324 | 8,247,117 |
Reads that passed QC | 4,073,814 | 5,075,814 | 4,251,624 | 4,467,084 |
Reads that mapped to the genome | 3,918,066 | 4,894,047 | 4,075,763 | 4,295,959 |
Total miRNA reads | 2,727,909 | 3,468,900 | 2,922,572 | 3,039,794 |
Bovine miRNA reads | 2,724,952 | 3,465,422 | 2,920,090 | 3,036,821 |
Human miRNA reads | 2,957 | 3,479 | 2,482 | 2,973 |
Novel miRNA reads | 1,493 | 2,034 | 1,597 | 1,700 |