Table 4. Centroids corresponding to ordinary-luminal subgroups.
Gene ID | Illumina probe | CL.Q1 | CL.Q2 | CL.Q3 | CL.Q4 |
---|---|---|---|---|---|
POLQ | ILMN_1740291 | 5.89 | 6.27 | 6.64 | 7.06 |
CKAP2L | ILMN_1751776 | 5.85 | 6.26 | 6.6 | 7.14 |
KIFC1 | ILMN_2222008 | 6.09 | 6.45 | 6.87 | 7.46 |
FOXM1 | ILMN_2344971 | 5.62 | 5.96 | 6.35 | 6.86 |
TROAP | ILMN_1700337 | 5.94 | 6.37 | 6.81 | 7.38 |
UBE2C | ILMN_2301083 | 7.54 | 8.50 | 9.15 | 10.06 |
AURKB | ILMN_1684217 | 6.07 | 6.50 | 6.91 | 7.58 |
NCAPG | ILMN_1751444 | 6.2 | 6.73 | 7.12 | 7.73 |
HJURP | ILMN_1703906 | 5.88 | 6.26 | 6.61 | 7.14 |
MCM10 | ILMN_2413898 | 5.93 | 6.31 | 6.65 | 7.23 |
The absolute mean values CL.Q1, CL.Q2, CL.Q3 and CL.Q4 of the ordinary-luminal subgroups (quantiles) were calculated based on the log2-normalised Illumina probes listed in the second column, corresponding to the top ten genes associated with variations in survival outcomes in the METABRIC training set, shown in the first column.