Table 2. Relationship of Non-Reference-Genome Like SNP Blocks to Haplotypes Surveyed by HapMap2.
| Genomic blocks | Chr | Start (kb) | Stop (kb) | Closest haplotypes | Branch length | Present in |
|---|---|---|---|---|---|---|
| c2r1 | 2 | 40000 | 44300 | W22 | 0.00000018 | China |
| c2r2 | 2 | 212450 | 224250 | BKN010 BKN010 M162W |
0.41156403 0.41156407 0.32027864 |
China USA North USA 12 |
| c4r1 | 4 | 169650 | 191550 | CAU178 | 0.64099035 | China |
| c5r1 | 5 | 201200 | 203000 | no single best match no single best match |
- - |
China USA North |
| c5r2 | 5 | 209732 | 211540 | B73 HapMap2 B73 HapMap2 B73 HapMap2 |
0.00000001 0.00000021 0.00000001 |
China USA North UC Berkeley |
| c6r1 | 6 | 120 | 8800 | CML511 | 0.59542615 | China |
| c6r2 | 6 | 20900 | 24670 | OH7B | 0.08905230 | China |