Table 3.
MDC protein members of rice.
Gene | Proteins | Locus | Coordinate 5′–3′ | AA | Subcellular localization | MW (Da) | pI |
---|---|---|---|---|---|---|---|
ONE MATH DOMAIN | |||||||
OsM1 | OsM1a | LOC_Os01g56800.1 | 32,784,325–32,773,565 | 1278 | NUC | 141,414 | 7.0917 |
OsM1b | LOC_Os01g56800.2 | 32,783,710–32,773,479 | 1253 | NUC | 138,487 | 6.8639 | |
OsM1c | LOC_Os01g56800.3 | 32,783,710–32,773,565 | 1250 | NUC | 138,199 | 6.8639 | |
OsM2 | OsM2a | LOC_Os01g56490.1 | 32,569,756–32,552,611 | 1111 | NUC | 129,097 | 5.4099 |
OsM3 | OsM3a | LOC_Os04g18830.1 | 10,474,689–10,475,396 | 236 | NUC | 25,518.8 | 8.2291 |
OsM4 | OsM4a | LOC_Os05g43280.1 | 25,176,651–25,186,745 | 1262 | NUC | 139,463 | 6.5865 |
OsM5 | OsM5a | LOC_Os07g06950.1 | 3,411,719–3,424,507 | 999 | CYT | 117,172 | 6.0369 |
OsM6 | OsM6a | LOC_Os07g20130.1 | 11,627,408–11,628,385 | 223 | CHL | 24,567.2 | 8.211 |
OsM7 | OsM7a | LOC_Os10g28130.1 | 14,607,689–14,606,812 | 214 | CYT | 22,946.7 | 4.7678 |
OsM8 | OsM8a | LOC_Os11g41360.1 | 24,812,851–24,813,612 | 224 | CHL | 25,088.8 | 9.1168 |
OsM9 | OsM9a | LOC_Os11g27030.1 | 15,564,541–15,565,050 | 170 | CYT | 19,223.3 | 8.0773 |
OsM10 | OsM10a | LOC_Os11g41230.1 | 24,724,484–24,725,050 | 189 | MIT | 20,316.4 | 6.6431 |
OsM11 | OsM11a | LOC_Os11g41240.1 | 24,727,308–24,727,862 | 185 | CHL | 20,177.4 | 7.1494 |
OsM12 | OsM12a | LOC_Os12g40520.1 | 25,069,598–25,077,639 | 1138 | NUC | 126,956 | 6.3151 |
OsM13 | OsM13a | LOC_Os12g30540.1 | 18,334,665–18,349,360 | 1126 | NUC | 131,937 | 5.6182 |
ONE MATH + ONE BTB DOMAIN | |||||||
OsMB1 | OsMB1 | LOC_Os02g20690.1 | 12,192,602–12,191,631 | 324 | NUC | 36,457.5 | 7.5467 |
OsMB2 | OsMB2 | LOC_Os02g20620.1 | 12,154,630–12,153,845 | 262 | NUC | 29,073.4 | 8.1126 |
OsMB3 | OsMB3 | LOC_Os02g20720.1 | 12,218,391–12,219,563 | 391 | CYT | 43,593.1 | 4.7974 |
OsMB4 | OsMB4 | LOC_Os02g20590.1 | 12,144,157–12,143,096 | 354 | CHL | 39,558.4 | 7.1767 |
OsMB5 | OsMB5a | LOC_Os03g57854.1 | 32,957,898–32,964,626 | 432 | NUC | 46,983.5 | 5.4251 |
OsMB5b | LOC_Os03g57854.2 | 32,957,898–32,964,626 | 379 | NUC | 41,390.4 | 5.3836 | |
OsMB6 | OsMB6 | LOC_Os04g53410.1 | 31,812,018–31,813,118 | 367 | CYT | 40,472.2 | 6.562 |
OsMB7 | OsMB7 | LOC_Os04g35310.1 | 21,474,453–21,472,975 | 369 | CHL | 40,695.4 | 6.8411 |
OsMB8 | OsMB8 | LOC_Os06g45730.1 | 27,685,556–27,683,619 | 365 | CHL | 39,446 | 6.5097 |
OsMB9 | OsMB9 | LOC_Os07g01140.1 | 85,934–82,397 | 396 | CHL | 43,753.6 | 6.6421 |
OsMB10 | OsMB10a | LOC_Os07g07270.1 | 3,614,403–3,610,786 | 425 | CYT | 46,159.7 | 5.1953 |
OsMB10b | LOC_Os07g07270.2 | 3,614,403–3,610,786 | 372 | CYT | 40,474.5 | 5.1341 | |
OsMB11 | OsMB11 | LOC_Os07g46160.1 | 27,545,275–27,550,563 | 435 | CHL | 47,093.8 | 6.7769 |
OsMB12 | OsMB12 | LOC_Os08g31430.1 | 19,442,644–19,441,238 | 402 | CHL | 44,016.8 | 5.4363 |
OsMB13 | OsMB13 | LOC_Os08g12960.1 | 7,694,865–7,693,822 | 307 | CYT | 34,089.8 | 5.2765 |
OsMB14 | OsMB14 | LOC_Os08g31450.1 | 19,452,059–19,451,229 | 277 | CYT | 30,753.6 | 6.0999 |
OsMB15 | OsMB15 | LOC_Os08g13180.1 | 7,834,796–7,835,950 | 385 | CHL | 42,640.7 | 6.509 |
OsMB16 | OsMB16 | LOC_Os08g13030.1 | 7,740,373–7,741,464 | 364 | CHL | 40,755.3 | 5.0818 |
OsMB17 | OsMB17 | LOC_Os08g03490.1 | 1,634,503–1,635,537 | 345 | CHL | 38,044.7 | 9.4141 |
OsMB18 | OsMB18 | LOC_Os08g03470.1 | 1,628,504–1,631,173 | 371 | CHL | 41,778.9 | 5.0812 |
OsMB19 | OsMB19 | LOC_Os08g13000.1 | 7,718,114–7,719,211 | 366 | CYT | 40,473.1 | 4.974 |
OsMB20 | OsMB20a | LOC_Os10g29180.1 | 15,199,437–15,202,164 | 376 | CYT | 41,732.3 | 5.2703 |
OsMB20b | LOC_Os10g29180.2 | 15,199,437–15,200,849 | 370 | CHL | 40,906.3 | 5.1365 | |
OsMB21 | OsMB21 | LOC_Os10g29230.1 | 15,218,256–15,219,365 | 370 | CHL | 40,959.7 | 5.1501 |
OsMB22 | OsMB22 | LOC_Os10g29310.1 | 15,245,005–15,246,475 | 364 | MIT | 40,272.1 | 6.4353 |
OsMB23 | OsMB23 | LOC_Os10g29220.1 | 15,213,679–15,215,127 | 357 | CHL | 39,791.7 | 7.8764 |
OsMB24 | OsMB24 | LOC_Os10g29050.1 | 15,138,447–15,140,147 | 363 | CHL | 40,324.2 | 7.1538 |
OsMB25 | OsMB25 | LOC_Os10g29100.1 | 15,167,886–15,166,777 | 370 | CHL | 40,985.6 | 6.3166 |
OsMB26 | OsMB26 | LOC_Os10g29020.1 | 15,124,391–15,125,458 | 313 | CHL | 34,483.3 | 6.3492 |
OsMB27 | OsMB27 | LOC_Os10g29330.1 | 15,255,885–15,257,174 | 360 | CHL | 39,869.1 | 4.7875 |
OsMB28 | OsMB28 | LOC_Os10g28860.1 | 15,044,042–15,045,403 | 373 | CYT | 40,566.9 | 5.7543 |
OsMB29 | OsMB29 | LOC_Os10g29110.1 | 15,170,899–15,169,211 | 410 | CHL | 44,731 | 8.0775 |
OsMB30 | OsMB30 | LOC_Os10g29380.1 | 15,268,591–15,269,703 | 371 | CYT | 41,008.4 | 4.6732 |
OsMB31 | OsMB31 | LOC_Os10g29150.1 | 15,183,967–15,182,652 | 391 | CHL | 43,209.9 | 5.6054 |
OsMB32 | OsMB32 | LOC_Os10g28990.1 | 15,110,429–15,111,589 | 387 | CHL | 43,499.1 | 7.2487 |
OsMB33 | OsMB33 | LOC_Os10g28790.1 | 15,015,529–15,016,650 | 374 | CYT | 40,251.5 | 7.1539 |
OsMB34 | OsMB34 | LOC_Os10g29750.1 | 15,468,056–15,466,956 | 367 | CHL | 40,763.5 | 6.3456 |
OsMB35 | OsMB35 | LOC_Os10g29290.1 | 15,239,701–15,240,792 | 364 | CHL | 40,122.8 | 6.2353 |
OsMB36 | OsMB36 | LOC_Os10g30360.1 | 15,774,570–15,775,465 | 254 | NUC | 28,742.1 | 5.8616 |
OsMB37 | OsMB37 | LOC_Os10g29840.1 | 15,506,569–15,507,648 | 360 | CHL | 40,329.2 | 6.6647 |
OsMB38 | OsMB38 | LOC_Os10g29740.1 | 15,462,806–15,463,918 | 371 | CHL | 40,929.5 | 6.5608 |
OsMB39 | OsMB39 | LOC_Os10g29790.1 | 15,486,180–15,487,367 | 396 | CYT | 43,715.9 | 4.7729 |
OsMB40 | OsMB40 | LOC_Os10g28760.1 | 15,003,427–15,004,575 | 383 | CYT | 42,366.3 | 6.5094 |
OsMB41 | OsMB41 | LOC_Os10g28780.1 | 15,012,324–15,010,666 | 384 | CYT | 42,247 | 6.3774 |
OsMB42 | OsMB42 | LOC_Os10g29410.1 | 15,281,164–15,279,959 | 402 | CYT | 43,832.4 | 5.8263 |
OsMB43 | OsMB43 | LOC_Os10g29950.1 | 15,547,685–15,546,516 | 350 | CYT | 38,533 | 4.6588 |
OsMB44 | OsMB44 | LOC_Os10g29850.1 | 15,519,165–15,514,718 | 356 | CHL | 39,671.2 | 7.0526 |
OsMB45 | OsMB45 | LOC_Os10g29810.1 | 15,499,315–15,498,122 | 398 | CHL | 43,691.5 | 5.357 |
OsMB46 | OsMB46 | LOC_Os10g29495.1 | 15,324,463–15,331,200 | 719 | CHL | 79,001.7 | 7.2184 |
OsMB47 | OsMB47 | LOC_Os10g29340.1 | 15,259,550–15,260,554 | 306 | CHL | 34,092.3 | 9.3761 |
OsMB48 | OsMB48 | LOC_Os10g28770.1 | 15,007,280–15,006,162 | 373 | CYT | 40,976.7 | 6.5747 |
OsMB49 | OsMB49 | LOC_Os10g29120.1 | 15,171,570–15,173,056 | 323 | CHL | 35,436.5 | 7.1534 |
OsMB50 | OsMB50 | LOC_Os11g41310.1 | 24,758,712–24,759,854 | 381 | CHL | 40,767.1 | 8.7039 |
OsMB51 | OsMB51 | LOC_Os11g41350.1 | 24,810,818–24,809,640 | 393 | CYT | 42,053.4 | 4.8638 |
OsMB52 | OsMB52 | LOC_Os11g40680.1 | 24,280,165–24,278,622 | 371 | CYT | 40,235.5 | 5.659 |
OsMB53 | OsMB53 | LOC_Os11g40220.1 | 23,994,340–23,993,291 | 343 | CHL | 37,346.5 | 7.5005 |
OsMB54 | OsMB54 | LOC_Os11g45560.1 | 27,579,282–27,576,676 | 371 | CHL | 39,994.9 | 9.9389 |
TWO MATH DOMAIN | |||||||
Os2M1 | Os2M1 | LOC_Os10g33830.1 | 17,956,926–17,945,282 | 686 | VAC | 78,376.8 | 9.6134 |
TWO MATH + TWO BTB DOMAIN | |||||||
Os2M2B1 | Os2M2B1 | LOC_Os11g41260.1 | 24,734,244–24,737,370 | 655 | CYT | 71,398.8 | 5.7745 |
The genes and their respective proteins have been prefixed by “OS” The alternative spliced forms have been postfixed with the alphabets like “a,” “b” and so on. The table shows their predicted sub-cellular localization like (CHL), Chloroplast; (CYT), Cytoplasm; (NUC), Nucleus; (VAC), Vacuole; (MIT), Mitochondria; (EXT), Extracellular; (CYS), Cytoskeleton; or (PER), Peroxisome; along with their (MW), molecular weight in (Da), Dalton and pI value.