Table 6.
Species | Strain | Polymorphic sites in sh-fabI* | Phenotype** | Comment | |||||
---|---|---|---|---|---|---|---|---|---|
1 | 5 | 5 | 5 | 6 | |||||
8 | 0 | 7 | 7 | 9 | 1 | ||||
1 | 6 | 7 | 8 | 3 | 1 | ||||
S. haemolyticus | JCSC1435 | T | G | A | T | C | T | S | Reference strain*** |
S. haemolyticus | 0281 | . | . | . | . | . | . | S | Triclosan susceptible clinical isolate*** |
S. aureus | T22051 | . | . | . | . | . | . | S | wt sequence |
S. aureus | KINW6058 | C | . | T | . | . | . | R | GTA81GCA V27A; ATT577TTT I193F |
S. epidermidis | 354_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 422.rep1_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 422.rep2_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 493_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 568_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 623_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 634_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 656_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 749_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 890_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 1013_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 1021.rep2_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 1022_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 1088_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. epidermidis | 1143_SEPI | . | A | . | . | . | C | R | GTT106ATT V36I; TC611TCC F204S |
S. aureus | F12753 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | F70077 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | GGMC6026 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | H27862 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | H27872 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | H64967 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | H67656 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | pHMPREF1625_3 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | pVR_MSSA_01 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | QBR-102278-1619 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | T34011 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | T78544 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | USFL050 | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | USFL145 | . | . | T | . | . | . | ATT577TTT I193F | |
S. epidermidis | 134_SEPI | . | . | T | . | . | . | ATT577TTT I193F | |
S. epidermidis | 154_SEPI | . | . | T | . | . | . | ATT577TTT I193F | |
S. epidermidis | 196_SEPI | . | . | T | . | . | . | ATT577TTT I193F | |
S. epidermidis | SAP110A | . | . | T | . | . | . | ATT577TTT I193F | |
S. aureus | F77919 | . | . | . | A | . | . | ATT578AAT I193N | |
S. aureus | LPIH6008 | . | . | . | A | . | . | ATT578AAT I193N | |
S. aureus | W21479 | . | . | . | A | . | . | ATT578AAT I193N | |
S. aureus | QBR-102278-1203 | . | . | . | . | G | . | R | GCT593GGT A198G |
S. aureus | S1805 | . | . | . | . | G | . | R | GCT593GGT A198G |
S. aureus | S2396 | . | . | . | . | G | . | R | GCT593GGT A198G |
S. argenteus | pST75 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. argenteus | Sa_LBSA043 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | 122 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | 1299_SAUR | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | 1315_SAUR | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | 71193 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | 78_SAUR | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | 84_SAUR | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | C5086 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | CO-86 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | H202 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | H216 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | LHSKBClinical | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | M1229 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | QBR-102278-1091 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | QBR-102278-1107 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | QBR-102278-2210 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | QBR-102278-2365 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | QBR-102278-2376 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | SH1 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | SH3 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | USA300_2014.C02 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | USFL046 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | USFL123 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | USFL129 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | USFL234 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. epidermidis | 1249_SEPI | . | . | . | . | . | G | R | TTC611TGC F204C |
S. epidermidis | 14.1.R1.SE | . | . | . | . | . | G | R | TTC611TGC F204C |
S. epidermidis | NIHLM020 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. haemolyticus | Sh29/312/L2 | . | . | . | . | . | G | R | TTC611TGC F204C |
S. aureus | QBR-102278-2092 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. aureus | QBR-102278-2351 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. aureus | QBR-102278-2605 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. aureus | M0277 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. aureus | USFL189 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. aureus | USFL190 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. aureus | W41757 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. epidermidis | 1026_SEPI | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 25-38 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 25-60 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 51-11 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 51-13 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 51-43 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 51-41 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 113101 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. haemolyticus | 127925 | . | . | . | . | . | C | R | TTC611TCC F204S |
S. warneri | NGS-ED-1001 | . | . | . | . | . | C | R | TTC611TCC F204S |
Polymorphic sites are indicated with respect to the sh-fabI sequence of S. haemolyticus strain JCSC1435.
These wt S. haemolyticus strains do not carry the TnSha1 element, therefore the fabI sequence reported is the one of the core genome.