TABLE 1.
Distribution of L. monocytogenes ribotypes among case and control farms
Subtype (lineage) | No. of L. monocytogenes isolates
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---|---|---|---|---|---|---|---|---|---|---|
Case farms
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Control farms
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Fecal | Feed | Soil | Water | Total (%) | Fecal | Feed | Soil | Water | Total (%) | |
DUP-1023A (II) | 2 | 0 | 4 | 2 | 8 (3.1) | 0 | 1 | 2 | 1 | 4 (2.5) |
DUP-1023B (II) | 1 | 1 | 0 | 1 | 3 (1.2) | 0 | 2 | 0 | 0 | 2 (1.3) |
DUP-1030B (II) | 0 | 1 | 2 | 4 | 7 (2.7) | 2 | 0 | 2 | 0 | 4 (2.5) |
DUP-1038B (I) | 6 | 2 | 1 | 1 | 10 (3.9) | 1 | 0 | 0 | 2 | 3 (1.9) |
DUP-1039A (II) | 1 | 2 | 3 | 2 | 8 (3.1) | 1 | 3 | 1 | 3 | 8 (5.1) |
DUP-1039C (II) | 9 | 4 | 15 | 11 | 39 (15.2) | 11 | 4 | 5 | 2 | 22 (13.9) |
DUP-1039E (II) | 7 | 3 | 2 | 3 | 15 (5.9) | 5 | 5 | 4 | 10 | 24 (15.2) |
DUP-1042B (I) | 13 | 9 | 18 | 5 | 45 (17.6) | 0 | 4 | 4 | 7 | 15 (9.5) |
DUP-1042C (I) | 4 | 1 | 2 | 1 | 8 (3.1) | 0 | 0 | 0 | 0 | 0 |
DUP-1044A (I) | 1 | 0 | 0 | 0 | 1 (0.4) | 5 | 2 | 1 | 0 | 8 (5.1) |
DUP-1044B (I) | 1 | 4 | 3 | 0 | 8 (3.1) | 0 | 0 | 0 | 1 | 1 (0.6) |
DUP-1045A (II) | 0 | 1 | 3 | 2 | 6 (2.3) | 3 | 5 | 6 | 4 | 18 (11.4) |
DUP-1045B (II) | 5 | 0 | 1 | 4 | 10 (3.9) | 0 | 0 | 1 | 0 | 1 (0.6) |
DUP-1045D (II) | 1 | 6 | 1 | 1 | 9 (3.5) | 1 | 1 | 1 | 2 | 5 (3.2) |
DUP-1045E (II) | 2 | 3 | 4 | 6 | 15 (5.9) | 0 | 0 | 0 | 0 | 0 |
DUP-1052A (I) | 0 | 3 | 0 | 0 | 3 (1.2) | 0 | 2 | 2 | 0 | 4 (2.5) |
DUP-1054A (II) | 1 | 1 | 1 | 1 | 4 (1.6) | 1 | 0 | 0 | 0 | 1 (0.6) |
DUP-1062D (II) | 2 | 0 | 2 | 0 | 4 (1.6) | 0 | 2 | 0 | 2 | 4 (2.5) |
DUP-1062E (II) | 2 | 1 | 0 | 3 | 6 (2.3) | 1 | 1 | 1 | 1 | 4 (2.5) |
DUP-1062F (II) | 0 | 0 | 1 | 0 | 1 (0.4) | 1 | 0 | 4 | 0 | 5 (3.2) |
110-239-S2 | 2 | 2 | 3 | 0 | 7 (2.7) | 0 | 0 | 1 | 0 | 1 (0.6) |
Other ribotype | 8 | 6 | 13 | 12 | 39 (15.2) | 7 | 5 | 6 | 6 | 24 (15.2) |
Lineage I | 32 | 24 | 34 | 12 | 102 (39.8) | 9 | 9 | 10 | 10 | 38 (24.1) |
Lineage II | 35 | 26 | 45 | 47 | 153 (59.8) | 30 | 28 | 29 | 30 | 117 (74.1) |
Lineage III | 1 | 0 | 0 | 0 | 1 (0.4) | 0 | 0 | 2 | 1 | 3 (1.9) |
Total | 68 | 50 | 79 | 59 | 256 | 39 | 37 | 41 | 41 | 158 |