Table 2.
Highest identities of individual CCLB, LWLB and WFLB14 genes with other TuMV isolates at nucleotide (nt) and amino acid (aa) levels.
| Region (Gene) | CCLB | LWLB | WFLB14 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Isolate Name | nt (%) | aa (%) | Isolate Name | nt (%) | aa (%) | Isolate Name | nt (%) | aa (%) | |
| P1 | Cal1 | 95.3 | 94.2 | Cal1 | 94.7 | 93.4 | Cal1 | 95.5 | 94.5 |
| HC-Pro | DEU4 | 97.0 | 99.8 | DEU4 | 96.9 | 99.8 | DEU4 | 96.7 | 99.8 |
| PIPO | PV0104/DEU4 | 99.5 | 98.4 | PV0104/DEU4 | 99.5 | 98.4 | PV0104/DEU4 | 99.5 | 98.4 |
| P3 | PV0104/DEU4 | 97.1 | 98.6 | PV0104/DEU4 | 96.9 | 98.6 | PV0104/DEU4 | 96.8 | 98.6 |
| 6K1 | PV0104/DEU4 | 99.4 | 100.0 | PV0104/DEU4 | 98.1 | 100.0 | PV0104/DEU4 | 99.4 | 100.0 |
| CI | DEU4 | 98.7 | 99.8 | DEU4 | 98.6 | 99.8 | DEU4 | 98.3 | 99.8 |
| 6K2 | PV0104/DEU4 | 98.1 | 100.0 | PV0104/DEU4 | 96.9 | 96.2 | Cal1 | 98.1 | 100 |
| NIa-VPg | Cal1 | 95.5 | 99.0 | Cal1 | 95.7 | 99.0 | Cal1 | 95.8 | 99.5 |
| NIa-Pro | ITA8 | 91.5 | 98.8 | ITA8 | 90.5 | 98.8 | ITA8 | 90.9 | 98.8 |
| NIb | USA6 | 93.6 | 98.8 | USA6 | 93.3 | 98.6 | USA6 | 93.5 | 98.8 |
| CP | PV0104/DEU4 | 96.6 | 99.0 | PV0104/DEU4 | 96.5 | 99.0 | PV0104/DEU4 | 96.6 | 98.6 |
| Polyprotein | DEU4 | 94.9 | 98.1 | DEU4 | 94.6 | 97.9 | DEU4 | 94.7 | 98.0 |
| Genome Sequence | DEU4 | 95.0 | - | DEU4 | 94.7 | - | DEU4 | 94.8 | - |