Table 1. Genotyping analysis with 15 microsatellite markers of 3 reference type I, II, and III strains, the HTI01 strain isolated in the present study, and 43 strains collected in human cases of toxoplasmosis from South America and the Caribbean region by the French national reference center for toxoplasmosis.
Microsatellite markers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Isolate | Year | BRCa code | Data | TUB2 | W35 | TgM-A | B18 | B17 | M33 | MIV.1 | MXI.1 | M48 | M102 | N60 | N82 | AA | N61 | N83 |
GT1 | 1980 | TgA00004 | REF I | 291 | 248 | 209 | 160 | 342 | 169 | 274 | 358 | 209 | 168 | 145 | 119 | 265 | 087 | 306 |
ME49 | 1965 | TgA00001 | REF II | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 215 | 174 | 142 | 111 | 265 | 091 | 310 |
VEG | 1988 | TgH00005 | REF III | 289 | 242 | 205 | 160 | 336 | 165 | 278 | 356 | 213 | 188 | 153 | 111 | 267 | 089 | 312 |
HTI01 | 2009 | TgH40001 | TIb | 289 | 242 | 207 | 162 | 336 | 169 | 274 | 356 | 237 | 166 | 142 | 111 | 281 | 093 | 312 |
AMZ01 | 2003 | TgH18005 | AMZTc | 289 | 242 | 203 | 160 | 344 | 165 | 276 | 356 | 211 | 168 | 142 | 109 | 271 | 087 | 320 |
AMZ02 | 2002 | TgH18002 | AMZT | 289 | 246 | 203 | 160 | 337 | 165 | 274 | 356 | 209 | 172 | 136 | 111 | 251 | 109 | 310 |
AMZ03 | 2001 | TgH18001 | AMZT | 289 | 246 | 203 | 160 | 344 | 167 | 272 | 356 | 229 | 176 | 142 | 113 | 263 | 085 | 312 |
AMZ04 | 2004 | TgH18009 | AMZT | 291 | 242 | 203 | 160 | 338 | 167 | 274 | 356 | 209 | 188 | 138 | 115 | 263 | 091 | 312 |
AMZ05 | 2002 | TgH18003 | AMZT | 291 | 242 | 203 | 160 | 339 | 165 | 272 | 358 | 221 | 174 | 138 | 107 | 277 | 095 | 312 |
AMZ06 | 2004 | TgH18013 | AMZT | 291 | 242 | 203 | 160 | 346 | 167 | 272 | 356 | 217 | 170 | 147 | 127 | 257 | 085 | 310 |
AMZ07 | 1997 | TgH00009 | AMZT | 291 | 242 | 203 | 162 | 344 | 167 | 276 | 356 | 217 | 170 | 142 | 113 | 277 | 091 | 308 |
AMZ08 | 2011 | TgH18051 | AMZT | 291 | 242 | 205 | 160 | 340 | 165 | 276 | 356 | 211 | 176 | 138 | 105 | 269 | 087 | 316 |
AMZ09 | 2010 | TgH42001 | AMZT | 291 | 246 | 203 | 158 | 346 | 169 | 272 | 356 | 229 | 172 | 142 | 105 | 261 | 105 | 316 |
AMZ10 | 2007 | TgH18028 | AMZT | 291 | 246 | 203 | 160 | 326 | 167 | 276 | 356 | 211 | 178 | 147 | 111 | 259 | 087 | 306 |
AMZ11 | 2009 | TgH18039 | AMZT | 291 | 246 | 203 | 160 | 342 | 171 | 274 | 356 | 213 | 172 | 149 | 105 | 273 | 089 | 318 |
AMZ12 | 2012 | TgH19006 | AMZT | 293 | 246 | 203 | 162 | 344 | 171 | 272 | 356 | 211 | 182 | 138 | 105 | 267 | 091 | 302 |
AMZ13 | 2012 | TgH19008 | AMZT | 291 | 246 | 203 | 160 | 334 | 167 | 274 | 356 | 209 | 174 | 142 | 109 | 201 | 085 | 306 |
AMZ14 | 2003 | TgH18004 | AMZT | 291 | 246 | 205 | 166 | 338 | 165 | 274 | 356 | 213 | 172 | 138 | 119 | 259 | 083 | 312 |
AMZ15 | 2011 | TgH18048 | AMZT | 293 | 242 | 203 | 162 | 344 | 167 | 274 | 358 | 217 | 176 | 138 | 115 | 273 | 085 | 316 |
AMZ16 | 2003 | TgH18007 | AMZT | 289 | 242 | 203 | 158 | 344 | 171 | 272 | 356 | 209 | 182 | 149 | 121 | 265 | 089 | 317 |
AMZ17 | 2004 | TgH18008 | AMZT | 289 | 246 | 203 | 158 | 338 | 167 | 276 | 354 | 213 | 168 | 138 | 111 | 281 | 093 | 318 |
AMZ18 | 2006 | TgH18021 | AMZT | 291 | 246 | 205 | 166 | 334 | 167 | 272 | 356 | 213 | 174 | 151 | 107 | 267 | 087 | 325 |
BRA01 | 2009 | TgH23028 | CTd | 289 | 242 | 205 | 160 | 342 | 165 | 278 | 358 | 233 | 164 | 145 | 111 | 316 | 089 | 308 |
BRA02 | 2000 | TgH24001 | CT | 289 | 242 | 205 | 160 | 342 | 165 | 278 | 358 | 237 | 164 | 145 | 111 | 316 | 089 | 308 |
BRA03 | 2012 | TgH14011 | CT | 289 | 242 | 205 | 162 | 334 | 169 | 272 | 356 | 227 | 164 | 142 | 117 | 334 | 087 | 308 |
BRA04 | 2014 | TgH34032 | TI | 289 | 242 | 205 | 162 | 344 | 165 | 278 | 358 | 223 | 164 | 142 | 111 | 263 | 105 | 312 |
BRA05 | 2005 | TgH25010 | CT | 289 | 242 | 205 | 162 | 344 | 165 | 278 | 358 | 225 | 164 | 142 | 111 | 263 | 111 | 312 |
BRA06 | 2009 | TgH23018 | TI | 289 | 242 | 205 | 162 | 344 | 165 | 278 | 358 | 225 | 164 | 142 | 111 | 269 | 089 | 312 |
BRA07 | 2011 | TgH13117 | TI | 289 | 242 | 205 | 162 | 344 | 165 | 278 | 358 | 227 | 164 | 142 | 111 | 263 | 119 | 312 |
BRA08 | 1994 | TgH32005 | CT | 291 | 242 | 205 | 160 | 362 | 165 | 278 | 356 | 225 | 174 | 140 | 111 | 265 | 091 | 314 |
BRA09 | 2006 | TgH32069 | CT | 291 | 242 | 205 | 162 | 362 | 165 | 278 | 356 | 223 | 166 | 151 | 111 | 263 | 093 | 337 |
BRA10 | 1991 | TgH00006 | CT | 291 | 242 | 205 | 162 | 362 | 169 | 272 | 358 | 221 | 166 | 142 | 111 | 332 | 095 | 339 |
GLP01 | 2010 | TgH40002 | CT | 291 | 242 | 205 | 162 | 336 | 165 | 278 | 356 | 211 | 164 | 147 | 109 | 277 | 087 | 312 |
GLP02 | 1992 | TONT | CT | 289 | 242 | 205 | 162 | 336 | 165 | 278 | 356 | 213 | 164 | 142 | 111 | 279 | 087 | 312 |
GLP03 | 2009 | TgH29086 | TI | 291 | 242 | 205 | 162 | 342 | 165 | 278 | 356 | 211 | 164 | 142 | 109 | 277 | 087 | 312 |
GLP04 | 2002 | TgH29005 | TI | 291 | 242 | 205 | 162 | 342 | 165 | 278 | 356 | 211 | 164 | 142 | 109 | 277 | 087 | 312 |
GLP05 | 2005 | TgH13006 | TI | 291 | 242 | 205 | 162 | 342 | 165 | 278 | 356 | 213 | 164 | 142 | 109 | 277 | 087 | 312 |
GUF01 | 2002 | TgH20001 | CT | 291 | 242 | 205 | 162 | 336 | 165 | 278 | 356 | 213 | 164 | 142 | 109 | 267 | 089 | 312 |
GUF02 | 2004 | TgH13013 | TI | 289 | 242 | 205 | 162 | 336 | 165 | 278 | 356 | 229 | 164 | 147 | 111 | 261 | 089 | 312 |
GUF03 | 2014 | TgH18057 | CT | 291 | 248 | 209 | 160 | 342 | 165 | 278 | 354 | 209 | 166 | 140 | 113 | 277 | 095 | 304 |
GUF04 | 2014 | TgH19010 | CT | 289 | 242 | 205 | 160 | 336 | 165 | 278 | 356 | 209 | 190 | 147 | 111 | 265 | 089 | 312 |
GUF05 | 2007 | TgH18022 | NRe | 289 | 248 | 209 | 160 | 336 | 165 | 278 | 356 | 209 | 166 | 149 | 121 | 271 | 087 | 306 |
MTQ01 | 2007 | TgH16001 | TI | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 174 | 147 | 119 | 271 | 089 | 335 |
MTQ02 | 2007 | TgH16003 | TI | 291 | 242 | 205 | 162 | 342 | 165 | 278 | 356 | 211 | 164 | 142 | 109 | 277 | 087 | 312 |
MTQ03 | 2010 | TgH16004 | CT | 289 | 244 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 113 | 259 | 101 | 310 |
MTQ04 | 2013 | TgH16008 | CT | 291 | 242 | 205 | 162 | 336 | 165 | 278 | 356 | 213 | 164 | 142 | 111 | 277 | 087 | 312 |
MTQ05 | 2013 | TgH16010 | CT | 291 | 242 | 205 | 162 | 336 | 165 | 278 | 356 | 213 | 164 | 142 | 111 | 283 | 085 | 312 |
aBRC, Toxoplasma Biological Resource Center.
bTI, toxoplasmosis in patient with immunosuppression.
cAMZT, Amazonian toxoplasmosis.
dCT, congenital toxoplasmosis.
eNR, not reported.