Table 2.
Recombinant bacterial lignin-degrading peroxidases. Examples of successfully produced recombinant bacterial lignin-degrading peroxidases and the substrates that have been used. The activity of the enzymes (if stated) is shown in parentheses. ABTS: 2,2-azinobis (3-ethylbenzothiazoline-6-sulfonate), DCP: 2,4-dichlorophenol, DMP: 2,6-dimethoxyphenol, DOPA: L-3,4-dihydroxyphenylalanine, VA: veratryl alcohol.
| enzyme | origin | host organism | localization | substrate (activity) | Ref |
|---|---|---|---|---|---|
| extracellular lignin peroxidase | Streptomyces viridosporus | Pichia pastoris | extracellular | DCP (∼1.1 (AU) min−1) DOPA |
49 |
| DyP-type (Tfu_3078) | Thermobifida fusca | Escherichia coli | periplasm | Reactive Blue 19 (Km 29 µM, kcat 10 s−1) | 50 |
| TfuDyP | T. fusca | E. coli | intracellular | ABTS (Km 0.86 ± 0.07 mM, kcat 28.1 ± 1 s−1) DCP (Km 5.51 ± 0.5 mM, kcat 2.86 ± 0.1 s−1) guaiacolphenol (Km 0.126 ± 0.01 mM, kcat 0.136 ± 0.03 s−1) pyrogallol (Km 11.29 ± 1 mM, kcat 6.63 ± 0.25 s−1) Reactive Blue 4 (Km 0.179 ± 0.01 mM, kcat 1.88 ± 0.07 s−1) guaiacylglycerol-β-guaiacyl etherKraft lignin |
51 |
| DyP (DyP2) | Amycolatopsis sp. 75iv2 | E. coli | extracellular | kcat/ Km (M−1 s−1)ABTS ((6.6 ± 0.9) × 106)Reactive Blue 5 ((7.1 ± 0.9) × 105)Reactive Black 5 ((1.6 ± 0.1) × 105)Mn2+ ((1.2 ± 0.2) × 105)guaiacylglycerol-β-guaiacol ether,veratrylglycerol-β-guaiacol ether | 52 |
| DyP-type (dyp Pa) | Pseudomonas aeruginosa | E. coli | intracellular | Reactive Blue 5 (4395 µM mg−1 min−1) Reactive Blue 19 (107 µM mg−1 min−1) Reactive Black 5 (704 µM mg−1 min−1) DMP (786 µM mg−1 min−1) |
53 |
| DyP | Anabaena sp strain PCC7120 | E. coli | intracellular | Reactive Blue 5 (Km 3.6 M, kcat/Km 1.2 × 107 M−1 s−1) | 54 |
| PpDyPBsDyP | Pseudomonas putidaBacillus subtilis | E. coli | intracellular | (PpDyP // BsDyP) ABTS (40 ± 0.9 U mg−1 // 15 ± 1 U mg−1) Reactive Blue 5 (15 ± 0.2 U mg−1 // 11 ± 0.6 U mg−1) guaiacol (0.2 ± 0.004 U mg−1 // 0.2 ± 0.006 U mg−1) syringaldehyde (0.11 ± 0.005 U mg−1 // 0.004 ± 0.0002 U mg−1) acetosyringone (0.16 ± 0.008 U mg−1 // 0.012 U mg−1) |
55 |
| BsDyP | B. subtilis | E. coli | intracellular | ABTS (66.80 U mg−1) VA (0.13 U mg−1) Reactive Blue 19 (11.55 U mg−1) Reactive Black 5 (17.65 U mg−1) veratrylglycerol-β-guaiacolether (0.086 U mg−1) |
56 |
| SviDyP | Saccharomonospora viridis | E. coli | intracellular | Reactive Blue 19 (1.29 U mg−1) Reactive Green 19 (1.32 U mg−1) Reactive Yellow 2 (4.86 U mg−1) Reactive Black 5 (0.96 U mg−1) Reactive Red 120 (0.69 U mg−1) Brilliant Green (12.24 U mg−1) Malachite Green (8.4 U mg−1) Crystal Violet (4.11 U mg−1) Azure B (1.62 U mg−1) DMP (0.06 U mg−1) VA (0.03 U mg−1) eucalyptus kraft pulp (Kappa decrease 21.8 %) |
57 |
| DyP1B | Pseudomonas fluorescens | E. coli | intracellular | ABTS (Km 1.13 ± 0.1 mM, kcat 13.5 ± 0.4 s−1) DCP (Km 1.25 ± 0.1 mM, kcat 0.66 ± 0.02 s−1) guaiacol (Km 0.056 ± 0.006 mM, kcat 0.058 ± 0.001 s−1) pyrogallol (Km 4.0 ± 0.6 mM, kcat 2.5 ± 0.1 s−1) Reactive Blue 4 (Km 0.12 ± 0.01 mM, kcat 1.04 ± 0.03 s−1) Kraft lignin (Km 0.006 ± 0.001 mM, kcat 0.9 ± 0.1 s−1) |
58 |
| DypB | Rhodococcus jostii | E. coli | intracellular | ABTS (0.0549 ΔAbs min−1) β-aryl ether lignin model Kraft lignin (0.24 ΔAbs 10 min−1) nitrated lignin (0.0081 ΔAbs 20 min−1) wheat straw lignocellulose |
59 |
| DyPA | R. jostii | E. coli | intracellular | ABTS (Km 8.2 mM, kcat 16.83 s−1) | 60 |
| peroxidase | R. jostii | R. jostii | extracellular | wheat straw lignocellulose (96 mg L−1 vanillin53 mg L−1 p-hydroxybenzaldehyde 3-120 mg L−1 vanillic acid 23-86 mg L−1 ferulic acid) |
61 |