Skip to main content
. 2016 Jun 13;7(3):145–154. doi: 10.1080/21655979.2016.1191705

Table 2.

Recombinant bacterial lignin-degrading peroxidases. Examples of successfully produced recombinant bacterial lignin-degrading peroxidases and the substrates that have been used. The activity of the enzymes (if stated) is shown in parentheses. ABTS: 2,2-azinobis (3-ethylbenzothiazoline-6-sulfonate), DCP: 2,4-dichlorophenol, DMP: 2,6-dimethoxyphenol, DOPA: L-3,4-dihydroxyphenylalanine, VA: veratryl alcohol.

enzyme origin host organism localization substrate (activity) Ref
extracellular lignin peroxidase Streptomyces viridosporus Pichia pastoris extracellular DCP (∼1.1 (AU) min−1)
DOPA
49
DyP-type (Tfu_3078) Thermobifida fusca Escherichia coli periplasm Reactive Blue 19 (Km 29 µM, kcat 10 s−1) 50
TfuDyP T. fusca E. coli intracellular ABTS (Km 0.86 ± 0.07 mM, kcat 28.1 ± 1 s−1)
DCP (Km 5.51 ± 0.5 mM, kcat 2.86 ± 0.1 s−1)
guaiacolphenol (Km 0.126 ± 0.01 mM, kcat 0.136 ± 0.03 s−1)
pyrogallol (Km 11.29 ± 1 mM, kcat 6.63 ± 0.25 s−1)
Reactive Blue 4 (Km 0.179 ± 0.01 mM, kcat 1.88 ± 0.07 s−1)
guaiacylglycerol-β-guaiacyl etherKraft lignin
51
DyP (DyP2) Amycolatopsis sp. 75iv2 E. coli extracellular kcat/ Km (M−1 s−1)ABTS ((6.6 ± 0.9) × 106)Reactive Blue 5 ((7.1 ± 0.9) × 105)Reactive Black 5 ((1.6 ± 0.1) × 105)Mn2+ ((1.2 ± 0.2) × 105)guaiacylglycerol-β-guaiacol ether,veratrylglycerol-β-guaiacol ether 52
DyP-type (dyp Pa) Pseudomonas aeruginosa E. coli intracellular Reactive Blue 5 (4395 µM mg−1 min−1)
Reactive Blue 19 (107 µM mg−1 min−1)
Reactive Black 5 (704 µM mg−1 min−1)
DMP (786 µM mg−1 min−1)
53
DyP Anabaena sp strain PCC7120 E. coli intracellular Reactive Blue 5 (Km 3.6 M, kcat/Km 1.2 × 107 M−1 s−1) 54
PpDyPBsDyP Pseudomonas putidaBacillus subtilis E. coli intracellular (PpDyP // BsDyP)
ABTS (40 ± 0.9 U mg−1 // 15 ± 1 U mg−1)
Reactive Blue 5 (15 ± 0.2 U mg−1 // 11 ± 0.6 U mg−1)
guaiacol (0.2 ± 0.004 U mg−1 // 0.2 ± 0.006 U mg−1)
syringaldehyde (0.11 ± 0.005 U mg−1 // 0.004 ± 0.0002 U mg−1)
acetosyringone (0.16 ± 0.008 U mg−1 // 0.012 U mg−1)
55
BsDyP B. subtilis E. coli intracellular ABTS (66.80 U mg−1)
VA (0.13 U mg−1)
Reactive Blue 19 (11.55 U mg−1)
Reactive Black 5 (17.65 U mg−1)
veratrylglycerol-β-guaiacolether (0.086 U mg−1)
56
SviDyP Saccharomonospora viridis E. coli intracellular Reactive Blue 19 (1.29 U mg−1)
Reactive Green 19 (1.32 U mg−1)
Reactive Yellow 2 (4.86 U mg−1)
Reactive Black 5 (0.96 U mg−1)
Reactive Red 120 (0.69 U mg−1)
Brilliant Green (12.24 U mg−1)
Malachite Green (8.4 U mg−1)
Crystal Violet (4.11 U mg−1)
Azure B (1.62 U mg−1)
DMP (0.06 U mg−1)
VA (0.03 U mg−1)
eucalyptus kraft pulp (Kappa decrease 21.8 %)
57
DyP1B Pseudomonas fluorescens E. coli intracellular ABTS (Km 1.13 ± 0.1 mM, kcat 13.5 ± 0.4 s−1)
DCP (Km 1.25 ± 0.1 mM, kcat 0.66 ± 0.02 s−1)
guaiacol (Km 0.056 ± 0.006 mM, kcat 0.058 ± 0.001 s−1)
pyrogallol (Km 4.0 ± 0.6 mM, kcat 2.5 ± 0.1 s−1)
Reactive Blue 4 (Km 0.12 ± 0.01 mM, kcat 1.04 ± 0.03 s−1)
Kraft lignin (Km 0.006 ± 0.001 mM, kcat 0.9 ± 0.1 s−1)
58
DypB Rhodococcus jostii E. coli intracellular ABTS (0.0549 ΔAbs min−1)
β-aryl ether lignin model
Kraft lignin (0.24 ΔAbs 10 min−1)
nitrated lignin (0.0081 ΔAbs 20 min−1) wheat straw lignocellulose
59
DyPA R. jostii E. coli intracellular ABTS (Km 8.2 mM, kcat 16.83 s−1) 60
peroxidase R. jostii R. jostii extracellular wheat straw lignocellulose
(96 mg L−1 vanillin53 mg L−1 p-hydroxybenzaldehyde
3-120 mg L−1 vanillic acid
23-86 mg L−1 ferulic acid)
61