Table 4.
Sequence identity matrix (%) among the ITS2 (a), 28S (b) and 18S (c) sequences of the various Clinostomidae taxa as retrieved from GenBank
| (a) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequences | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | |
| 1. | gb|KF781298|Clinostomoides brieni, India* | ID | |||||||||
| 2. | gb|KF781297|Euclinostomum heterostomum, India* | 91.0 | ID | ||||||||
| 3. | gb|JF718641.1|Clinostomum marginatum, Canada | 78.7 | 72.9 | ID | |||||||
| 4. | gb|JF718636.1|C. marginatum, Canada | 78.0 | 72.0 | 98.5 | ID | ||||||
| 5. | gb|FJ609420.1|C. complanatum, Italy | 95.3 | 88.5 | 77.3 | 76.5 | ID | |||||
| 6. | gb|JF718621.1|Clinostomum sp., Italy | 23.1 | 22.8 | 28.0 | 28.4 | 23.5 | ID | ||||
| 7. | gb|JF718643.1|C. marginatum, Canada | 76.3 | 70.5 | 96.1 | 97.6 | 74.8 | 29.1 | ID | |||
| 8. | gb|JF718642.1|C. marginatum, Canada | 51.7 | 48.9 | 64.0 | 64.9 | 52.4 | 43.7 | 66.5 | ID | ||
| 9. | gb|JX631140.1|C. tataxumui, Mexico | 85.8 | 80.0 | 88.2 | 87.1 | 83.4 | 25.6 | 85.7 | 57.3 | ID | |
| 10. | gb|FJ609422.1|C. phalacrocoracis, Kenya | 96.3 | 88.8 | 77.9 | 77.0 | 96.0 | 23.2 | 75.3 | 51.3 | 83.8 | ID |
| (b) | ||||||||
|---|---|---|---|---|---|---|---|---|
| Sequences | 1 | 2 | 3 | 4 | 5 | 6 | 7 | |
| 1. | gb|KF781299|Clinostomoides brieni, India* | ID | ||||||
| 2. | gb|FJ609420.1|Clinostomum complanatum, Italy | 32.7 | ID | |||||
| 3. | gb|JX235337.1|C. complanatum, Croatia | 16.1 | 40.1 | ID | ||||
| 4. | gb|FJ609422.1|C. phalacrocoracis, Kenya | 32.3 | 98.1 | 39.2 | ID | |||
| 5. | gb|AY222175.1|Clinostomum sp., Australia | 46.6 | 18.6 | 32.3 | 18.5 | ID | ||
| 6. | gb|AY222176.1|Clinostomum sp., USA | 46.9 | 18.9 | 32.1 | 18.8 | 96.5 | ID | |
| 7. | gb|AY858877.1|Clinostomid sp., USA | 45.1 | 18.0 | 33.8 | 17.8 | 95.2 | 92.1 | ID |
| (c) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequences | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | |
| 1. | gb|KF781300|Clinostomoides brieni, India* | ID | |||||||||
| 2. | gb|FJ609423.1|Clinostomum phalacrocoracis, Kenya | 95.8 | ID | ||||||||
| 3. | gb|AY245701.1|C. complanatum, Israel | 95.5 | 98.2 | ID | |||||||
| 4. | gb|FJ609422.1|C. phalacrocoracis, Kenya | 95.9 | 99.9 | 98.1 | ID | ||||||
| 5. | gb|FJ970655.1|C. piscidium, India | 21.0 | 22.1 | 22.4 | 22.1 | ID | |||||
| 6. | gb|FJ970654.1|C. giganticum, India | 29.9 | 30.8 | 31.0 | 30.8 | 67.3 | ID | ||||
| 7. | gb|AY245760.1|C. marginatum, USA | 96.3 | 98.3 | 98.0 | 98.3 | 22.0 | 30.8 | ID | |||
| 8. | gb|FJ609420.1| C. complanatum, Italy | 96.0 | 98.9 | 99.2 | 98.9 | 22.3 | 30.8 | 98.5 | ID | ||
| 9. | gb|AY222094.1|Clinostomum sp., Australia | 95.6 | 98.2 | 99.1 | 98.2 | 23.0 | 31.3 | 97.9 | 98.5 | ID | |
| 10. | gb|AY829252.1|Clinostomid sp., USA | 86.6 | 88.7 | 89.0 | 88.7 | 25.1 | 34.2 | 88.4 | 89.0 | 89.5 | ID |
* Query sequence generated from the study; highest value marked in bold