Table 2.
Epidemiological data, genotypes, lineages, and sublineages of Triângulo Mineiro rotavirus A strains, based on the VP7, VP8*, VP6, NSP4, and NSP5 genes.
| Name of the strainsa | Patients age | Origin | Month-year of collection | Electropherotype | Genotypes |
Lineages and sublineages |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| VP7 | VP8* | VP6 | NSP4 | NSP5 | VP7 | VP8* | VP6 | NSP4 | NSP5 | |||||
| Uberaba | ||||||||||||||
| RVA/Human-wt/BRA/UB-09 MG/2005/G1P[8] | 1 year | Inpatient (HC) | Sep-2005 | Long | G1 | P[8] | I1 | E1 | H1 | I-A | 3.1 | – | – | – |
| RVA/Human-wt/BRA/UB-16 MG/2005/G9P[8] | 2 years | Inpatient (HC) | Sep-2005 | Long | G9 | P[8] | I1 | E1 | H1 | III | 3.1 | – | – | – |
| RVA/Human-wt/BRA/UB-142 MG/2006/GxP[8] | 2 years | Outpatient | Jul-2006 | Long | Gx | P[8] | I1 | E1 | H1 | – | 3.1 | – | – | – |
| RVA/Human-wt/BRA/UB-144 MG/2006/G12Px | 1 year | Outpatient | Aug-2006 | Long | G12 | Px | I3 | E3 | H6 | II | – | – | – | – |
| RVA/Human-wt/BRA/UB-146 MG/2006/G12P[8] | 11 months | Outpatient | Aug-2006 | Long | G12 | P[8] | I1 | E1 | H1 | III | 3.1 | – | – | – |
| RVA/Human-wt/BRA/UB-150 MG/2006/G12Px | 4 years | Outpatient | Aug-2006 | Long | G12 | Px | I3 | Ex | H6 | II | – | – | – | – |
| RVA/Human-wt/BRA/UB-157 MG/2006/G9P[8] | 1 year | Outpatient | Aug-2006 | Long | G9 | P[8] | I1 | E1 | H1 | III | 3.1 | – | – | – |
| RVA/Human-wt/BRA/UB-169 MG/2006/G9P[8] | 1 year | Inpatient (HC) | Aug-2006 | Long | G9 | P[8] | I1 | E1 | H1 | III | 3.6 | – | – | – |
| RVA/Human-wt/BRA/UB-208 MG/2006/G9P[8] | 1 year | Outpatient | Sep-2006 | Long | G9 | P[8] | I1 | E1 | H1 | III | 3.1 | – | – | – |
| RVA/Human-wt/BRA/UB-558 MG/2011/G9P[8] | 23 months | Inpatient (HC) | Dec-2011 | Long | G9 | P[8] | I1 | E1 | H1 | III | 3.3 | – | – | – |
| RVA/Human-wt/BRA/UB-154 MG/2006/G2P[4] | 3 years | Outpatient | Aug-2006 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-1 | IVa | VIIa | VIa | IIIa |
| RVA/Human-wt/BRA/UB-170 MG/2006/G2P[4] | 8 months | Inpatient (HC) | Aug-2006 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-1 | IVa | VIIa | VIa | IIIa |
| RVA/Human-wt/BRA/UB-226 MG/2006/G2P[4] | 5 months | Outpatient | Sep-2006 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-1 | IVa | VIIa | – | IIIa |
| RVA/Human-wt/BRA/UB-239 MG/2006/G2P[4] | 1 year | Outpatient | Oct-2006 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-1 | IVa | VIIa | – | IIIa |
| RVA/Human-wt/BRA/UB-299 MG/2007/G2P[4] | 1 year | Inpatient (HC) | Jun-2007 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-1 | IVa | VIIa | VIa | IIIa |
| RVA/Human-wt/BRA/UB-320 MG/2007/G2P[4] | 11 months | Inpatient (HC) | Aug-2007 | Short | G2 | P[4] | I2 | E2 | Hx | IVa-3 | IVa | VIIb | VIb | – |
| RVA/Human-wt/BRA/UB-354 MG/2007/G2P[4] | 1 year | Inpatient (HC) | Oct-2007 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVa | VIIb | VIb | IIIa |
| RVA/Human-wt/BRA/UB-432 MG/2008/G2P[4] | 1 year | Inpatient (HC) | Sep-2008 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVa | VIIb | VIb | IIIa |
| RVA/Human-wt/BRA/UB-433 MG/2008/G2P[4] | 4 years | Outpatient | Sep-2008 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVb | VIIb | X | IIIb |
| Uberlândia | ||||||||||||||
| RVA/Human-wt/BRA/IP-38 MG/2008/G2P[4] | 3 years | Inpatient (HSG) | Aug-2008 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVb | VIIb | XII | IIIb |
| RVA/Human-wt/BRA/IP-47 MG/2008/G2P[4] | 3 years | Inpatient (HM) | Sep-2008 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVb | VIIb | X | IIIb |
| RVA/Human-wt/BRA/IP-71 MG/2008/G2P[4] | 2 years | Inpatient (HSG) | Nov-2008 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVa | VIIa | VIb | IIIa |
| RVA/Human-wt/BRA/IP-346 MG/2010/G2P[4] | 1 year | Inpatient (HM) | May-2010 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVb | VIIb | VIb | IIIb |
| RVA/Human-wt/BRA/IP-364 MG/2010/G2P[4] | 2 years | Inpatient (HSG) | Jul-2010 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-1 | IVb | VIIb | X | IIIb |
| RVA/Human-wt/BRA/IP-393 MG/2010/G2P[4] | 6 months | Outpatient | Sep-2010 | Short | G2 | P[4] | I2 | E2 | H2 | IVa-3 | IVb | VIIb | X | IIIb |
| RVA/Human-wt/BRA/IP-218 MG/2009/G3P[4] | 4 years | Outpatient | Sep-2009 | Long | G3 | P[4] | I2 | E3 | H3 | III | IVa | VIIb | – | – |
| RVA/Human-wt/BRA/IP-447 MG/2011/G8P[4] | 5 years | Outpatient | Jan-2011 | Short | G8 | P[4] | I2 | E2 | H2 | II | IVa | VIIa | X | IIIa |
UB, Uberaba; IP, Uberlândia; HC, Hospital da Criança; HSG, Hospital Santa Genoveva; HM, Hospital Madrecor; x, was not possible to amplify.
a
Name of RV strains according to the nomenclature proposed by Matthijnssens et al.25