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. Author manuscript; available in PMC: 2016 Jun 30.
Published in final edited form as: Curr Protoc Toxicol. 2016 Feb 1;67:20.11.1–20.11.25. doi: 10.1002/0471140856.tx2011s67

Table 4.

Cloning PCR primers and conditions

Species Genome Target
gene
Forward primer Seq Reverse primer Seq Amplicon
(bp)
Annealing
temperature
(oC)
Reference
C. elegans mt nd-1 Not Reported Not Reported NR NR Bratic et al. (2009)
nuc cox-4 5’- ATCT AAGCTT GCC
GAC TGG AAG AAC
TTG TC -3’
5’- ATAG CTCGAG
GCG GAG ATC ACC
TTC CAG TA -3’
184 60 This unit
H. sapiens mt tRNA-
Leu(UUR)
5’- ATCTAAGCTT GCC
TTC CCC CGT AAA TGA
TA -3’
5’- ATAG CTCGAG
AGG AAT GCC ATT
GCG ATT AG -3’
215 55 This unit
nuc B2M 5’- ATCT AAGCTT TGC
TGT CTC CAT GTT TGA
TGT ATC T -3’
5’- ATAG CTCGAG
TCT CTG CTC CCC
ACC TCT AAG T -3’
106 62 This unit
F. heteroclitus mt 16S rRNA 5’- ATAG AAGCTT AAA
ATT AAC GGC CCC AAC
CC -3’
5’- ACTT CTCGAG
CCG AGT TCC TTC
TTC CCC TT -3’
131 64 This unit
nuc CFTR 5’- ATAG AAGCTT GCC
GCT GCC TTC ATT GCT
GT -3’
5’- AATT CTCGAG
ATG AGC TGG GTG
TGC GCT GA -3’
234 65 Hunter et al. (2010)
D. rerio mt nd-1 5’- ATCT AAGCTT CGT
TTA CCC CAG ATG CAC
CT -3’
5’- ATAG CTCGAG
GTG CGA TTG GTA
GGG CGA TA -3’
215 60 This unit
nuc vtg2 5’- ATCT AAGCTT TGG
ATA CCT GAC CGA
GAG CT -3’
5’- ATAG CTCGAG
AGA CAA CTC TTA
CGG CTG GC -3’
110 60 This unit

Underlined regions denote restriction sites.