Table 4.
Cloning PCR primers and conditions
| Species | Genome | Target gene |
Forward primer Seq | Reverse primer Seq | Amplicon (bp) |
Annealing temperature (oC) |
Reference |
|---|---|---|---|---|---|---|---|
| C. elegans | mt | nd-1 | Not Reported | Not Reported | NR | NR | Bratic et al. (2009) |
| nuc | cox-4 | 5’- ATCT AAGCTT GCC GAC TGG AAG AAC TTG TC -3’ |
5’- ATAG CTCGAG GCG GAG ATC ACC TTC CAG TA -3’ |
184 | 60 | This unit | |
| H. sapiens | mt | tRNA- Leu(UUR) |
5’- ATCTAAGCTT GCC TTC CCC CGT AAA TGA TA -3’ |
5’- ATAG CTCGAG AGG AAT GCC ATT GCG ATT AG -3’ |
215 | 55 | This unit |
| nuc | B2M | 5’- ATCT AAGCTT TGC TGT CTC CAT GTT TGA TGT ATC T -3’ |
5’- ATAG CTCGAG TCT CTG CTC CCC ACC TCT AAG T -3’ |
106 | 62 | This unit | |
| F. heteroclitus | mt | 16S rRNA | 5’- ATAG AAGCTT AAA ATT AAC GGC CCC AAC CC -3’ |
5’- ACTT CTCGAG CCG AGT TCC TTC TTC CCC TT -3’ |
131 | 64 | This unit |
| nuc | CFTR | 5’- ATAG AAGCTT GCC GCT GCC TTC ATT GCT GT -3’ |
5’- AATT CTCGAG ATG AGC TGG GTG TGC GCT GA -3’ |
234 | 65 | Hunter et al. (2010) | |
| D. rerio | mt | nd-1 | 5’- ATCT AAGCTT CGT TTA CCC CAG ATG CAC CT -3’ |
5’- ATAG CTCGAG GTG CGA TTG GTA GGG CGA TA -3’ |
215 | 60 | This unit |
| nuc | vtg2 | 5’- ATCT AAGCTT TGG ATA CCT GAC CGA GAG CT -3’ |
5’- ATAG CTCGAG AGA CAA CTC TTA CGG CTG GC -3’ |
110 | 60 | This unit |
Underlined regions denote restriction sites.