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. 2016 Jun 30;11(6):e0157366. doi: 10.1371/journal.pone.0157366

Table 7. Fish species detected by eDNA metabarcoding in 2014 within the impoundment (IM1 and IM2 samples) and at the R0 site (downstream from the dam, three filtrations).

Fish taxa IM—Impoundment R0—Tier River
Latin name Common name IM1 IM2 R0a R0b R0c
Perca fluviatilis Perch 158105 97188 383 106 639
Rutilus rutilus Roach 58107 39628 23037 19855 84578
Esox lucius Pike 30101 36902 30 91
Lepomis gibbosus Pumpkinseed 16362 37991 75 23 217
Squalius cephalus Chub 15944 35406 39 308 113
Coregonus lavaretus Lavaret 23371 328 11 24
Cyprinus carpio Carp 7753 14064 38
Tinca tinca Tench 4515 17184
Scardinius erythrophthalmus Rudd 4264 11726 14 27
Leuciscus spp. - 5738 7772 126 77 299
Salaria fluviatilis Freshwater blenny 3887 1027 80 30 230
Gobio spp. - 4430 205 11 67 67
Alburnus alburnus Bleak 379 2218
Abramis brama Bream 1134 147 21
Salmo trutta Trout 168 142 38
Carassius spp. - 32
SG1* - 60 2568 218
Barbus barbus Barbel 1563
Alburnoides bipunctatus Spirlin 935
Barbatula sp. - 143
Cottus spp. - 37
Lampetra spp. - 33
Oncorhynchus mykiss Rainbow trout 17
Phoxinus phoxinus Minnow 15
Total richness 16 21

Number of reads per species and per filtration.

*The molecular marker does not discriminate between Telestes souffia, Chondrostoma nasus and Chondrostoma toxostoma.