Table 1.

Default simulation parameters, used except where otherwise noted.

Parameter	Low Ne	High Ne
locus length (kilobases)	100	5
a (threshold proportion)	0.1	0.1
haploid sample size (per population)	50	50
Ne (effective population size)	10,000	2,500,000
θ (population mutation rate)	0.001	0.01
ρ (population recombination rate)	0.001	0.05
4Nem (population migration rate)	0	0
population split time (coalescent units)	0.05	0.05
onset of selection (coalescent units)	0.025	0.025
s (selection coefficient)	0.01	0.001