Table 4.
Genes for tRNA posttranscriptional modification in S. coelicolor and S. albus genomes
| Protein | S. coelicolor A3(2) homolog | S. albus J1074 homolog | Annotation |
|---|---|---|---|
| IscS | SCO5486 | XNR_1347 | tRNAsulfurtransferase, PLP-dependent |
| IscU | SCO1920 | XNR_4942 | iron-sulfur cluster assembly enzyme |
| TruA | SCO4731 | XNR_3758 | tRNApseudouridine(38-40) synthase |
| TruB | SCO5709 | XNR_1143 | tRNApseudouridine synthase B |
| TruC | SCO1625 | XNR_4806 | tRNApseudouridine synthase C |
| DusB | SCO2497 | XNR_4421 | tRNA-dihydrouridine synthase B |
| TrmA | SCO5901 | XNR_0992 | tRNAm5(U34)methyltransferase |
| TrmB | SCO4111 | XNR_2813 | tRNA (guanine-N(7)-)-methyltransferase |
| TrmD | SCO5594 | XNR_1214 | tRNA m(1)G37 methyltransferase, SAM-dependent |
| TrmH | SCO4236 | XNR_2558 | tRNA mG18-2’-O-methyltransferase, SAM-dependent |
| RluA | SCO2073 | XNR_4806 | 23S rRNApseudouridine(746), tRNApseudouridine(32) synthase, SAM-dependent |
| TadA | SCO4038 | XNR_2881 | tRNA-specific adenosine deaminase |
| FolE | SCO3403 | XNR_3431 | GTP cyclohydrolase I |
| QueA | SCO1804 | XNR_5018 | S-adenosylmethionine:tRNAribosyltransferase-isomerase |
| MnmA | SCO5488 | XNR_1345 | tRNA(Gln,Lys,Glu) U34 2-thiouridylase |
| MiaA | SCO5791 | XNR_1074 | delta(2)-isopentenylpyrophosphatetRNA-adenosine transferase |
| MiaB | SCO5787 | XNR_1078 | tRNA-i(6)A37 methylthiotransferase |
| AroA | SCO6819 | XNR_1588 | 5-Enolpyruvylshikimate-3-phosphate synthetase |
| AroB | SCO1494 | XNR_5357 | 3-Dehydroquinate synthase |
| AroC | SCO1496 | XNR_5355 | Chorismate synthase |
| AroE | SCO1498 | XNR_5354 | Dehydroshikimatereductase, NAD(P)-binding |
| AroD | SCO1961 | XNR_4909 | 3-Dehydroquinate dehydratase |
| AroK | SCO1495 | XNR_5356 | Shikimate kinase I |
| TsaA | SCO5032 | XNR_4120 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent |
| TsaB | SCO4750 | XNR_3789 | tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD |
| TsaC | SCO5362 | XNR_1471 | t(6)A37 threonylcarbamoyladenosine biosynthesis protein |
| TsaD | SCO4752 | XNR_3791 | tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein |
| TsaE | SCO4747 | XNR_3786 | tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein |
| TilS | SCO3406 | XNR_3428 | tRNA(Ile)-lysidinesynthetase |