Table 3.
Putative mRNA targets for differentially expressed miRNAs.
| Bioinformatic predicting tools/mmu-miR differentially expressed |
||||
|---|---|---|---|---|
| Target Gene | miRNA body Map v1.1 | microT v4 | microT-CDS v5 | Tarbase |
| Bmp5 | mmu-miR-203 | – | – | – |
| Cyp26b1 | mmu-miR-24, 200a, 205, 9, 217 | – | mmu-miR-195, 200ª | – |
| Dlx5 | mmu-miR-124, 203, 200a | – | mmu-miR-124 | mmu-miR-200a |
| Dlx6 | mmu-miR-205 | – | mmu-miR-7a-2-star | – |
| Edn1 | mmu-miR-203 | – | mm-miR-344d, 135a-2-star | – |
| Ednra | mmu-miR-203, 27b, 324-3p, 497, 195, 124 | – | mmu-miR-27b | mmu-miR-324-3p |
| Eya1 | mmu-miR-23b, 27b, 200a, 203, 205, 497, 195, 124, 217 | mmu-miR-27b | mmu-miR-124, 10a-star, 195, 497, 27b | – |
| Fgf8 | mmu-miR-195 | – | – | – |
| Fgf10 | mmu-miR-9, 200c, 200b, 203, 375, 429, 137, 217, 344 | – | mmu-miR-137, 124, 9 | – |
| Frem2 | mmu-miR-9, 200b, 24, 205, 27b, 200c, 429, 216a, | – | mmu-miR-9, 429, 200c, 200b, 24 | – |
| Gsc | mmu-miR-200c | – | – | – |
| Hoxa1 | mmu-miR-23b, 28, 203, 9, 10a, 216a | – | mmu-miR-23b | – |
| Hoxa2 | mmu-miR-23b | – | – | – |
| Irf6 | mmu-miR-24, 27b, 200c, 200b, 324-3p, 429, 216a, | – | – | – |
| Pax8 | mmu-miR-203, 9 | – | – | – |
| Prrx1 | mmu-miR-203, 205, 375, 9, 10a, 124 | – | mmu-miR-3093-3p, 124, 9, 195, 497, 375 | – |
| Prrx2 | mmu-miR-124, 216a | – | – | |
| Prkra | mmu-miR-10a, 10b | – | mmu-miR-10b, 27b-star | – |
| Sall1 | mmu-miR-195, 497, 28, 205 | – | mmu-miR-195, 497 | – |
| Six1 | mmu-miR-27b, 200a, 200b, 200c, 205, 375, 429, 10a, 217 | – | mmu-miR-217, 7a-2-star, 429, 375, 200a | – |
| Six4 | mmu-miR-23b, 24, 27b, 200a, 200b, 429, 497, 195, 9, 10a, 124, 216a, 217 | mmu-miR-124, 9 | mm-miR-344d, 124, 9, 205-star, 27b, 23b | – |
| Tcfap2a | mmu-miR-195, 200a, 200b, 200c, 375, 429, 497, 137 | – | mmu-miR-137, 124-star, 497, 429, 200c, 200b | – |
| Wnt5a | mmu-miR-205, 375 | – | mmu-miR-205-star, 200a | – |
| Chuk | mmu-miR-23b, 124, 200a, | – | mmu-miR-124, 23b | – |
| Hoxb1 | – | – | mmu-miR-124, 375 | – |