Table 3. Repetitive sequences of Ilex pubescens calculated in REPuter.

Repeat length (bp)	Repeat bases	Repeat location	Copy of repeat location
15	TCTTTCTTTTTTTTT	trnH-GUG psbA spacer	clpP
16	TTTTTTTTTTTTTTTT	trnH-GUG psbA spacer	trnM-CAU atpE spacer
16	TTGAAAAAAAAAAAAA	atpA-atpF spacer	trnS-UGA lhbA spacer
16	TGAAAAAAAAAAAAAA	atpA-atpF spacer	rps18-rpl20 spacer
16	ATTTCTTTTTTAGTTT	atpH-atpI spacer	ycf1
16	TTTTTTGAAAAAAAAA	rps2-rpoC2 spacer	ndhF-rpl32 spacer
16	GAAAAAAAAAAAAAGA	lhbA trnG-UCC spacer	rps18-rpl20 spacer
16	AAAAAAAAAAAAAGAA	lhbA trnG-UCC spacer	rpl14-rpl16 spacer
16	ATTATTAATTTGTATG	trnF-GAA ndhJ spacer	ycf1
16	TAGTCACTTCTTTTTT	psaJ-rpl33 spacer	ycf2
16	CTTTCTTTTTTTTTTC	clpP	infA-rps8 spacer
16	ATTTTTATTTTGTTTT	rpl16-rps3 spacer	rps19-rpl2 spacer
17	TTTTTTTTTTTTTTATT	trnH-GUG psbA spacer	psbE-petL spacer
17	CTTTTTTGAAAAAAAAA	atpA-atpF spacer	rps2-rpoC2
17	TTTTTTGAAAAAAAAAA	atpA-atpF spacer	ndhF-rpl32
17	TAGTAAAAATAAAAAGA	trnM-CAU psbD spacer	accD-psaI spacer
17	AAGACGAAAAAAAAAAA	trnT-UGU trnL-UAA spacer	petA-psbJ spacer
17	CTATATATTTTTCCAGT	cemA-petA spacer	petD
17	GCTTTTGTTTATAAAAA	rpl16-rps3 spacer	rpl16-rps3 spacer
17	GATATTGATGCTAGTGA	ycf2	ycf2
18	TCCACTCAGCCATCTCTC	trnS-GCU	trnS-UGA
18	CGAAAATTCTTTTTTCTC	trnE-UUC trnM-CAU spacer	rpl32 trnL-UAG spacer
18	ATTGTATCCATTGAGCAA	psaB	psaA
18	ATGCAATAGCTAAATGAT	psaB	psaA
18	CTTTTCTGAGTGAACTAG	accD	accD
18	AGAACTACGAGATCACCC	trnI-GAU	trnA-UGC
19	TGCGGGTTCGATTCCCGCT	trnG-GCC	trnG-UCC
21	ATGCTGCTGCAGAATAAACCA	trnH-GUG psbA spacer	rpl22
21	AAGAGAGGGATTCGAACCCTC	trnS-GCU	trnS-UGA
21	AGACAGGATTTGAACCCGTGA	trnfM-CAU	trnP-UGG
23	TCATTGTTCCACTCTTTGACAAC	rrn4.5-rrn5 spacer	rrn4.5-rrn5 spacer
26	GTGAGATTTTCATCTCATACGGCTCC	ycf3	ndhA
26	TTATTTATTTTATATTCTATTTCAAT	rps4 trnT-UGU spacer	rps4 trnT-UGU spacer
29	TCGATATTGATGATAGTGACGATATTGAT	ycf2	ycf2