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. 2016 Jul 6;6:29105. doi: 10.1038/srep29105

Table 3. Ten top scored canonical pathways differentially regulated in 10 μM DON treated porcine jejuna explants and list of genes in each pathway.

Ingenuity Canonical Pathways −log (p-value) Ratio Molecules
a. Up-regulated pathways
Granulocyte Adhesion and Diapedesis 1.18E01 1.1E-01 CCL3,IL1B,MMP12,EZR,CCL20,CLDN4,CCL3L1/CCL3L3,SELE,MMP13,CXCL2,VCAM1,CXCL8, CXCR4, IL18, IL1RN,TNF,CXCR2,ICCL4,XCL1
Agranulocyte Adhesion and Diapedesis 1.13E01 1.04E-01 CCL3,IL1B,MMP12,EZR,CCL20,CLDN4,CCL3L1/CCL3L3,SELE,MMP13,CXCL2,VCAM1,CXCL8, CXCR4,IL18,IL1RN,TNF,CXCR2,IL1A,CCL4,XCL1
Glucocorticoid Receptor Signaling 1.11E01 7.69E-02 HSPA2,NFKB1,CCL3,CSF2,JAK2,IL1B,PLAU,SELE,NFKBIE,NFATC1,NFKBIA,VCAM1,CXCL8, FOS,IL1RN,DUSP1,SGK1,NR3C1,TNF,SMAD3,CDKN1A,IL10,FOXO3
Differential Regulation of Cytokine Production in Intestinal Epithelial Cells by IL-17A and IL-17F 1.07E01 3.91E-01 CCL3,CSF2,IL1B,TNF,IL1A,IL17A,IL10,CCL4,IL17F
Communication between Innate and Adaptive Immune Cells 1.01E01 1.25E-01 CCR7,CCL3,CSF2,IL1B,CCL3L1/CCL3L3,CD40,CXCL8,CD83,IL18,IL1RN,TNF,IL1A,IL10,CCL4
Differential Regulation of Cytokine Production in Macrophages and T Helper Cells by IL-17A and IL-17F 1.01E01 4.44E-01 CCL3,CSF2,IL1B,TNF,IL17A,IL10,CCL4,IL17F
Hepatic Fibrosis/Hepatic Stellate Cell Activation 9.55E00 1.03E-01 CCR7,NFKB1,IL1B,EDNRB,MMP13,CD40,VCAM1,CXCL8,IFNGR1,TNF,SMAD3,IL1A,EDN1,IL4R, IL10,TIMP
IL-10 Signaling 9.48E00 1.54E-01 FOS,IL18,NFKB1,IL1RN,IL1B,SOCS3,TNF,IL1A,IL4R,IL10,NFKBIE,NFKBIA
T Helper Cell Differentiation 9.41E00 1.67E-01 GATA3,IFNGR1,BCL6,IL18,STAT4,TNF,ICOSLG/LOC102723996,IL17A,IL4R,IL10,CD40,IL17F
Atherosclerosis Signaling 9.4E00 1.08E-01 NFKB1,IL1B,SELE,MMP13,CD40,VCAM1,CXCL8,CXCR4,IL18,IL1RN,TNF,IL1A,F3,TNFRSF12A, PLA2G4A
b. Down-regulated pathways
PXR/RXR Activation 2.28E00 2.17E-02 ABCC2, CPT1A
FXR/RXR Activation 2.07E00 1.82E-02 ABCC2, MTTP
Mitochondrial L-carnitine Shuttle Pathway 1.57E00 4.55E-02 CPT1A
Granulocyte Adhesion and Diapedesis 1.49E00 1.1E-02 CCL24, PECAM1
Agranulocyte Adhesion and Diapedesis 1.44E00 1.04E-02 CCL24, PECAM1
LPS/IL-1 Mediated Inhibition of RXR Function 1.31E00 8.16E-03 ABCC2, CPT1A
Complement System 1.28E00 2.86E-02 C4BPA
Erythropoietin Signaling 9.87E-01 1.27E-02 CBL
Chemokine Signaling 9.75E-01 1.33E-02 CCL24
Ephrin B Signaling 9.46E-01 1.22E-02 CBL