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. 2016 May 12;90(11):5503–5513. doi: 10.1128/JVI.03149-15

FIG 4.

FIG 4

Diagnostic lineage/sublineage-specific SNPs identified from comparisons of the 78 complete HPV11 genomes. SNP positions relative to the genome of the prototype HPV11 isolate (PaVE accession no. HPV11REF) are displayed across lineages (lineages A and B) and sublineages (sublineages A1, A2, A3, and A4). The representative region (208 bp) used for whole-genome-based phylogenetic clustering is marked with vertical arrows.