Table 3.
Linkage disequilibrium statistic between rs879022 on Chromosome 2 and surrounding variants identified in the NCBI GWAS catalog and eQTL browser.
Position (bp) | Marker ID | Phenotype | Gene | R2 | d′ |
---|---|---|---|---|---|
79198167 | rs11683503 | Contrast sensitivity1 | Intergenic | 0.034 | 0.2 |
79539987 | rs13409348 | Bipolar disorder2 | Intergenic | 0.022 | 0.292 |
79632346 | rs2100290 | Alcohol consumption3 | Intergenic | 0.001 | 0.131 |
79687251 | rs399885 | Response to antipsychotic treatment4 | Intergenic | 0 | 0.044 |
79709353 | rs7570469 | Response to antipsychotic treatment4 | Intergenic | 0.009 | 0.516 |
79778112 | rs7597912 | CTNNA2 eQTL6 | CTNNA2 | 0.004 | 0.465 |
79922801 | rs11695685 | Protein quantitative trait loci5 | CTNNA2 | 0.033 | 1 |
80281172 | rs6738962 | Alzheimer’s disease (cognitive decline) 7 | CTNNA2 | 0.003 | 0.068 |
80715149 | rs7600563 | Excitement-Seeking8 | CTNNA2 | 0.004 | 0.335 |