TABLE 2.
Domain 4 similaritiesa
Domain 4 | E-value for similarity to domain 4 of: |
||
---|---|---|---|
E. coli σE | Phage 7-11 σ | E. coli σ70 | |
B. subtilis σW | 2e−15 | 2e−4 | No alignment |
E. coli σE | No alignment | 0.42 | |
Phage 7-11 σ | No alignment |
Pairwise alignment of σ4 domains predicted in protein sequences of phage ECF (7-11 and phiEco32), bacterial ECF (σE and σW), and group I (E. coli RpoD) σ factors. For the phiEco32 σ factor, the entire ECF domain was used in the analysis.