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. 2016 Jul 7;9:390. doi: 10.1186/s13071-016-1666-3

Table 2.

Suite of models considered in Stage 1 to estimate probability of hematozoa infection (Ψ) and probability of detecting hematozoa mtDNA (p)

Model K Model description
(.) 1 pr (infection) does not vary
month 3 pr (infection) varies by month (May, June, August)
May models (17 May – 27 May)
 sex 2 pr (infection) varies during May by sex
 species 4 pr (infection) varies during May by species (MALL, NOPI, AMWI, LESC)
 species + sex 5 pr (infection) varies during May by species and by sex to the same degree for all species
June models (10 July – 19 June)
 sex 2 pr (infection) varies during June by sex
 species 3 pr (infection) varies during June by species (MALL, NOPI, AMWI)
 species + sex 4 pr (infection) varies during June by species and by sex to the same degree for all species
August models (28 July – 20 August)a
 age 2 pr (infection) varies during August by age (adult, juvenile)
 sex 2 pr (infection) varies during August by sex
 age + sex 3 pr (infection) varies during August by age and by sex to the same degree for both age classes
 age * sex 4 pr (infection) varies during August by each age and sex class
 (ad * sex) + (juv) 3 pr (infection) varies during August by age and by sex for adult birds
 species 3 pr (infection) varies during August by species (MALL, NOPI, AGWT)
 species * age 6 pr (infection) varies during August by species and age
 species + age 4 pr (infection) varies during August by species and by age to the same degree for all species
 species * sex 6 pr (infection) varies during August by species and sex
 species + sex 4 pr (infection) varies during August by species and by sex to the same degree for all species
 species * age + sex 7 pr (infection) varies during August by species and age, and by sex to the same degree for all species
 species * sex + age 7 pr (infection) varies during August by species and sex, and by age to the same degree for all species
 species * age * sex 12 pr (infection) varies during August by species, age, and sex
 (ad * species * sex) + (juv * species) 9 pr (infection) varies during August by species and by sex for adult birds
August temporal trend models
  + day 1 pr (infection) during August varies in a linear trend with a single slope for all sources of variation
  + day * ageb 2 pr (infection) during August varies in a linear trend with a unique slope for each age class
 * day 2+ pr (infection) during August varies in a linear trend with a unique slope for each source of variation

This suite of models was considered independently for each of three hematozoa genera (Leucocytozoon, Haemoproteus, Plasmodium). K = number of model parameters applicable only to modeling of Ψ or p in a given month and is not representative of the total number of model parameters. Age of birds was either after-hatch-year (adult) or hatch-year (juvenile). Species abbreviations: AGWT American green-winged teal, AMWI American wigeon, LESC lesser scaup, MALL mallard, NOPI northern pintail

aAugust models were considered alone, with the additive temporal trend (+ day), with the temporal trend varying by age (+ day * age), and with the multiplicative temporal trend (* day)

bModel structure was applied only to August models containing variation in age