TABLE 2.
miRNA ID | miRNA target (gene symbol) | Molecular function in: |
||
---|---|---|---|---|
Inflammation | Fibrosis | Cancer | ||
miR-122-5p | IGF1R | × | × | × |
SRF | × | × | × | |
CCNG1 | × | |||
SLC7A1 | × | |||
BCL2L2 | × | |||
ADAM10 | × | × | × | |
PRKRA | ||||
WNT1 | × | × | × | |
miR-210-3p | FGFRL1 | × | ||
RAD52 | × | × | ||
EFNA3 | × | |||
BDNF | × | × | × | |
PTPN1 | × | |||
ISCU | × | |||
E2F3 | × | |||
MNT | × | × | × | |
miR-338-5p | LRP1 | × | × | |
miR-483-3p | SMAD4 | × | × | × |
BBC3 | × | |||
SRF | × | × | × | |
MAPK3 | × | |||
miR-574-5p | FOXN3 | × | ||
miR-885-5p | CDK2 | × | × | |
MCM5 | × | |||
miR-1 | HCN4 | × | ||
FOXP1 | × | |||
HCN2 | × | × | ||
PTMA | × | |||
MET | × | × | × | |
XPO6 | × | |||
TAGLN2 | × | × | × | |
LASP1 | × | × | ||
KCNE1 | × | |||
PNP | × | |||
PIM1 | × | × | ||
PAX3 | × | |||
TWF1 | × | × | ||
TWF2 | ||||
FN1 | × | × | ||
NOTCH3 | × | × | ||
FABP3 | × | × | ||
miR-10a-5p | HOXA1 | × | × | |
USF2 | × | × | ||
MAP3K7 | × | × | ||
BTRC | ||||
EPHA4 | × | × | ||
miR-127-3p | PRDM1 | × | × | |
BCL6 | × | × | ||
miR-132-3p | CDKN1A | × | × | × |
ARHGAP32 | ||||
RB1 | × | × | ||
HBEGF | × | × | × | |
miR-133b | KCNH2 | × | ||
FSCN1 | × | |||
FAIM | × | |||
EGFR | × | × | × | |
FGFR1 | × | × | × | |
HCN4 | × | |||
miR-143-3p | KRAS | × | × | × |
MYO6 | × | |||
DNMT3A | × | × | × | |
FNDC3B | × | |||
MAPK7 | × | |||
FSCN1 | × | |||
SERPINE1 | × | × | × | |
MACC1 | × | × | ||
JAG1 | × | × | × | |
AKT1 | × | × | × | |
miR-146a-5p | CXCR4 | × | × | × |
TLR2 | × | × | × | |
TRAF6 | × | × | ||
IRAK1 | × | × | ||
BRCA1 | × | × | ||
NFKB1 | × | × | ||
EGFR | × | × | × | |
CD40LG | × | × | × | |
SMAD4 | × | × | × | |
HNF1 | × | × | × | |
SHP1 | × | × | × | |
TLR4 | × | × | × | |
miR-150-5p | MYB | × | × | × |
EGR2 | × | × | ||
MUC4 | × | × | × | |
ZEB1 | × | × | × | |
miR-206 | MET | × | × | × |
NOTCH3 | × | × | ||
ESR1 | × | × | ||
PAX3 | × | |||
miR-212-3p | MECP2 | × | × | × |
PEA15 | × | |||
PTCH1 | × | × | ||
RB1 | × | × | ||
miR-21-5p | RASGRP1 | × | ||
BCL2 | × | × | × | |
TIMP3 | × | × | × | |
SOX5 | × | |||
MTAP | × | × | × | |
RECK | × | × | ||
TGFBR2 | × | × | × | |
PTEN | × | × | × | |
E2F1 | × | × | × | |
LRRFIP1 | × | × | ||
TPM1 | × | |||
NFIB | × | |||
APAF1 | × | × | ||
BTG2 | × | |||
PDCD4 | × | × | × | |
RHOB | × | × | ||
SERPINB5 | × | × | ||
BMPR2 | × | × | × | |
DAXX | × | × | ||
TP63 | × | |||
MSH2 | × | × | ||
MSH6 | × | |||
ISCU | × | |||
EIF4A2 | × | |||
ANKRD46 | × | |||
CDK2AP1 | × | |||
DUSP10 | × | |||
PPARA | × | × | × | |
ANP32A | × | |||
SMARCA4 | × | |||
FASLG | × | × | × | |
miR-494-3p | PTEN | × | × | × |
CDK6 | × | × | ||
BCL2L11 | × | |||
miR-584-5p | ROCK1 | × | × | × |
miR-663a | JUNB | × | × | |
JUND | × |
The targets of miRNAs differentially regulated by HCV infection in hepatocyte-like Huh7.5.1 cells at 7 days postinfection were retrieved using the miRsystem tool. The involvement of these target genes in pathways related to inflammation, fibrosis, and cancer was assessed through miRsystem and a systematic screen of the available literature by use of PubMed. ×, involvement of miRNA target in the indicated process.