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. 2016 May 27;44(12):5773–5784. doi: 10.1093/nar/gkw486

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — Overview of the Reference Transcriptome (RefT). (A) Cumulative distribution of mapped reads on gene regions prior to normalisation and filtering. y-axis: cumulative distribution of reads; x-axis: the number of genes sorted by coverage in descending order (log10). Top-1, top-10, top-100, top-1000 and top-10K expressed genes are marked. (B) Density distribution of expression for the genes in Gencode (white), for the photoreceptor-specific genes (blue), and for RPE-specific genes (black). Gene density (y-axis) over the normalised expression level (x-axis) on a log-10 scale is shown. (C) The average expression of genes in the human retina divided by chromosome.