. 2016 Jul 8;11(7):e0158896. doi: 10.1371/journal.pone.0158896

Table 3. Examples of itemsets corresponding to some UniProt/Swiss-Prot entries of some prokaryotes with manual assertion evidence for pathway annotations.

Entry ID	Corresponding Itemset
Q8TRZ4	PATHWAY: One-carbon metabolism; methanogenesis from acetate, TAXON:Archaea, TAXON: Euryarchaeota, TAXON: Methanomicrobia, TAXON:Methanosarcinales, TAXON: Methanosarcinaceae, TAXON: Methanosarcina, IPR: IPR017896, IPR:IPR017900, IPR: IPR004460, IPR:IPR004137, IPR: IPR009051, IPR: IPR011254, IPR: IPR016099
P18335	PATHWAY: Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 4/4, PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2, 6-diaminopimelate from (S)-tetrahydrodipicolinate (succinylase route): step 2/3, TAXON: Bacteria, TAXON: Proteobacteria, TAXON: Gammaproteobacteria, TAXON: Enterobacteriales, TAXON: Enterobacteriaceae, TAXON: Escherichia, IPR:IPR017652, IPR: IPR004636, IPR:IPR005814, IPR: IPR015424, IPR:IPR015421, IPR: IPR015422

Entry ID

Corresponding Itemset

PATHWAY: One-carbon metabolism; methanogenesis from acetate, TAXON:Archaea, TAXON: Euryarchaeota, TAXON: Methanomicrobia, TAXON:Methanosarcinales, TAXON: Methanosarcinaceae, TAXON: Methanosarcina, IPR: IPR017896, IPR:IPR017900, IPR: IPR004460, IPR:IPR004137, IPR: IPR009051, IPR: IPR011254, IPR: IPR016099

P18335

PATHWAY: Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 4/4, PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2, 6-diaminopimelate from (S)-tetrahydrodipicolinate (succinylase route): step 2/3, TAXON: Bacteria, TAXON: Proteobacteria, TAXON: Gammaproteobacteria, TAXON: Enterobacteriales, TAXON: Enterobacteriaceae, TAXON: Escherichia, IPR:IPR017652, IPR: IPR004636, IPR:IPR005814, IPR: IPR015424, IPR:IPR015421, IPR: IPR015422