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. 2016 Jul 8;11(7):e0158371. doi: 10.1371/journal.pone.0158371

Table 1. Characteristics of 261 HIV-infected pulmonary tuberculosis suspects in Mbarara, Uganda by M. tuberculosis culture and TOP TB assay results.

Characteristic Overall Culture positive Culture negative P value
TOP positive TOP positive TOP negative Overall1 Two-way2
N 261 48 139 74
Age (years) 39.0 [30.5–47.0] 33.5 [28.0–40.0] 42.0 [33.0–49.0] 38.5 [31.0–48.8] 0.002 <0.001
Female sex 138 (53) 12 (25) 78 (56) 48 (65) <0.001 <0.001
Previous TB treatment* 33 (13) 3 (6) 23 (17) 7 (9) 0.04+ 0.05+
Years since previous TB treatment 9.3 [5.9–10.9] 5.4 9.3 [5.9–10.9] 11.9 [10.3–12.0] 0.28# 0.16#
N = 13 N = 1 N = 9 N = 3
CD4 (cells/mL)* 322 [104–495] 182 [54–338] 343.5 [93–457] 355 [158–590] 0.06 0.13
N = 172 N = 22 N = 92 N = 58
Sputum volume (mL) 3 [2–5] 4 [3–5] 3 [2–4.5] 3 [2–5] 0.33# 0.16#
Sputum appearance^ <0.001+ 0.05+
 Purulent 69 (27) 20 (42) 36 (26) 13 (18)
 Mucoid 36 (13) 10 (25) 23 (17) 3 (4)
 Salivary 156 (60) 18 (33) 80 (58) 58 (78)
Chest radiograph* 0.04+ 0.05+
 Normal 29/103 (28) 2/17 (12) 14/47 (30) 13/39 (33)
 Minimal 17/103 (17) 1/17 (6) 8/47 (17) 8/39 (21)
 Moderate 46/103 (45) 8/17 (47) 21/47 (45) 17/39 (44)
 Far advanced 11/103 (11) 6/17 (35) 4/47 (9) 1/39 (3)
Cavitation present 18/104 (17) 5/17 (29) 7/48 (15) 6/39 (15) 0.37+ 0.27+
Sputum AFB smear* <0.001+
 Negative 222 (85) 11 (23) 137 (99) 74 (100)
 Scanty 9 (3) 8 (17) 1 (1) 0 (0)
 1+ 10 (4) 10 (21) 0 (0) 0 (0)
 2+ 7 (3) 6 (13) 1 (1) 0 (0)
 3+ 13 (5) 13 (27) 0 (0) 0 (0)
Sputum MGIT culture
 Positive 48 (18) 48 (100) 0/139 (0) 0/74 (0) - -
 Contaminated 12 (5) 2/139 (1) 10/74 (14)
 MGIT DTP (days) 19 [13–33] 19 [13–33] NA NA -
Xpert Mtb/RIF *
 Positive 50/259 (19) 45/47 (96) 3/139 (2) 2/73 (3) <0.001+ <0.001+
 Indeterminate 4/259 (2) 1/47 (2) 1/139 (1) 2/73 (3)
M. tuberculosis 2-ponA genotype
 0T 5 (2) 4 (8) 1 (1) 0 - 0.005+
 1T 6 (2) 3 (6) 3 (2) 0
 1 2 (1) 0 2 (1) 0
 2 40 (15) 16 (33) 24 (17) 0
 3 93 (36) 18 (38) 74 (53) 1 (1)
 4 27 (10) 3 (6) 24 (17) 0
 Neg 88 (34) 4 (8) 11 (8) 73 (99)

Values are median [interquartile range] or number (percentage), unless otherwise specified

MGIT = Mycobacterial Growth Indicator Index (BACTEC 960, Becton Dickinson, U.S.A.); DTP = Days-to-positive; AFB = Acid-fast bacilli

1 P overall = Comparison between three groups

2 P two-way = Comparison between culture-positive/ TOP-positive vs. culture-negative/ TOP-positive

* Missing information: Previous TB treatment (1); CD4 cell count (85); Time since previous TB treatment (20); Chest X-ray extent of disease (154), cavitation (153); Sputum AFB smear (1); Xpert MTB/RIF (2)

^ Purulent sputum category includes purulent and muco-purulent; Mucoid category includes mucoid and muco-salivary

+ Fisher’s exact test.

# Kruskal-Wallis test or Wilcoxon test.