Table 2. Some of the genes that were differentially expressed among the five developmental stages of R. venosa.
| FPKM | ||||||
|---|---|---|---|---|---|---|
| Gene_id | C1 | D2 | C3 | J4 | Y5 | NR/Swissprot Description |
| Growth related genes | ||||||
| c145901_g1 | 28.17 ± 4.11 | 4.89 ± 0.20 | 4.83 ± 0.74 | 1.63 ± 0.17 | 1.13 ± 0.38 | Growth/differentiation factor 8 |
| c137141_g1 | 1.58 ± 0.77 | 0.11 ± 0.19 | 0.10 ± 0.18 | 51.52 ± 6.43 | 145.47 ± 9.43 | Fibropellin |
| c100045_g1 | 1.64 ± 0.16 | 0.65 ± 0.06 | 0.74 ± 0.41 | 0.17 ± 0.02 | 0.34 ± 0.07 | Nodal |
| c145993_g2 | 3.98 ± 1.76 | 0.97 ± 0.60 | 0.32 ± 0.56 | 50.06 ± 2.90 | 1.41 ± 0.04 | Actin |
| c146789_g2 | 9.02 ± 0.17 | 5.68 ± 0.64 | 5.68 ± 0.04 | 13.56 ± 0.67 | 13.01 ± 0.95 | Epidermal growth factor receptor |
| Nervous system related genes | ||||||
| c134668_g1 | 4.14 ± 0.32 | 2.12 ± 0.26 | 1.78 ± 0.24 | 2.32 ± 0.39 | 0.89 ± 0.29 | 5-Hydroxytryptamine receptor 1 |
| c138434_g1 | 2.58 ± 0.42 | 3.09 ± 0.08 | 3.44 ± 0.63 | 0.28 ± 0.20 | 0.00 ± 0.00 | Neuronal acetylcholine receptor |
| c156806_g2 | 4.76 ± 0.11 | 3.67 ± 0.14 | 3.39 ± 0.51 | 2.45 ± 0.04 | 1.22 ± 0.36 | Nitric oxide synthase |
| c90120_g1 | 71.07 ± 2.83 | 50.29 ± 1.91 | 49.18 ± 1.55 | 46.61 ± 1.98 | 101.93 ± 4.53 | GABA(A) receptor-associated protein |
| Digestive system related genes | ||||||
| c124801_g1 | 2083.42 ± 193.38 | 8288.19 ± 320.86 | 9144.35 ± 631.79 | 2226.16 ± 100.74 | 0.13 ± 0.23 | Conotoxin |
| c150903_g1 | 65.50 ± 5.18 | 70.21 ± 3.19 | 69.11 ± 7.10 | 2.64 ± 0.34 | 1.59 ± 0.09 | Exoglucanase XynX |
| c154739_g1 | 35.47 ± 1.81 | 526.05 ± 13.37 | 595.43 ± 28.38 | 22.31 ± 0.91 | 0.05 ± 0.01 | Endoglucanase E-4 |
| c95470_g1 | 3989.92 ± 168.41 | 11536.75 ± 123.56 | 13857.77 ± 358.89 | 2519.76 ± 154.86 | 3.09 ± 1.45 | vdg3 |
| c105120_g1 | 1.95 ± 0.37 | 12.40 ± 0.24 | 17.84 ± 3.84 | 1695.11 ± 50.76 | 6247.54 ± 525.34 | Developmentally-regulated vdg3 |
| c128291_g1 | 0.04 ± 0.03 | 0.02 ± 0.03 | 0.06 ± 0.06 | 29.25 ± 1.51 | 221.63 ± 15.27 | Trypsin |
| c147105_g1 | 0.30 ± 0.26 | 0.10 ± 0.10 | 0.00 ± 0.00 | 91.37 ± 7.91 | 187.18 ± 25.41 | Carboxypeptidase B |
| Immune system related genes | ||||||
| c115222_g1 | 4.27 ± 1.29 | 12.00 ± 0.68 | 12.61 ± 0.66 | 6.71 ± 0.37 | 36.95 ± 0.15 | Tumor Necrosis Factor |
| c137778_g1 | 0.62 ± 0.27 | 0.95 ± 0.17 | 1.35 ± 0.78 | 4.70 ± 0.98 | 163.68 ± 6.87 | Defensin |
| c149483_g1 | 3.29 ± 0.34 | 10.01 ± 2.01 | 10.32 ± 1.35 | 5.20 ± 0.89 | 24.37 ± 4.74 | toll2 |
| Apoptosis related genes | ||||||
| c132048_g1 | 22.78 ± 0.90 | 30.65 ± 1.10 | 26.18 ± 0.92 | 42.81 ± 2.64 | 14.86 ± 0.34 | Apoptosis-inducing factor 1 |
| c135194_g1 | 0.76 ± 0.10 | 0.61 ± 0.06 | 0.78 ± 0.10 | 2.54 ± 0.25 | 1.25 ± 0.19 | Caspase-7 |
| c147256_g2 | 18.34 ± 0.12 | 15.66 ± 0.35 | 15.15 ± 0.55 | 15.41 ± 0.52 | 7.53 ± 0.73 | Caspase-3 |
| c151900_g1 | 2.52 ± 0.69 | 5.06 ± 0.56 | 4.23 ± 0.88 | 4.61 ± 0.65 | 10.52 ± 0.62 | Apoptosis 2 inhibitor |
| Others | ||||||
| c116117_g1 | 7.06 ± 1.78 | 64.45 ± 4.37 | 52.10 ± 2.14 | 15.95 | 99.14 ± 9.69 | Calmodulin |
| c125727_g1 | 0.49 ± 0.12 | 0.37 ± 0.03 | 0.63 ± 0.24 | 62.61 | 3.70 ± 0.06 | Sulfotransferase 1C2 |
| c141012_g1 | 6.10 ± 0.55 | 6.37 ± 0.75 | 6.54 ± 0.97 | 70.58 | 8.93 ± 1.33 | Sulfotransferase 1A2 |
| c112229_g1 | 267.04 ± 8.16 | 223.74 ± 0.946 | 252.36 ± 11.47 | 53.19 ± 1.99 | 5.86 ± 0.62 | SARP-19 |