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. Author manuscript; available in PMC: 2017 Aug 1.

Published in final edited form as: Lung Cancer. 2016 May 13;98:33–42. doi: 10.1016/j.lungcan.2016.05.008

Fig. 1 — Regional plots of association results, recombination rates, and linkage disequilibrium for the (a) 15q25.1 marked by rs2036527; (b) 5p15.33 marked by rs2853677. Association results from a log-additive genetic model in −log10 P-values of the SNPs were shown according to their chromosomal positions (hg18) within 1Mb region centering around the index SNP. P values were based on the stage 1 only except for both rs2036527 and rs2853677 where the combined P values were shown. Linkage Disequilibrium (LD) r² values were estimated on 1000 Genomes Project data June 2010 YRI population (hg18). The colors of the dots reflect the LD with the index SNP as shown in the legend box. The figures were generated using locusZoom (http://csg.sph.umich.edu/locuszoom/).

Fig. 1 — Regional plots of association results, recombination rates, and linkage disequilibrium for the (a) 15q25.1 marked by rs2036527; (b) 5p15.33 marked by rs2853677. Association results from a log-additive genetic model in −log10 P-values of the SNPs were shown according to their chromosomal positions (hg18) within 1Mb region centering around the index SNP. P values were based on the stage 1 only except for both rs2036527 and rs2853677 where the combined P values were shown. Linkage Disequilibrium (LD) r² values were estimated on 1000 Genomes Project data June 2010 YRI population (hg18). The colors of the dots reflect the LD with the index SNP as shown in the legend box. The figures were generated using locusZoom (http://csg.sph.umich.edu/locuszoom/).